| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1313 |
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| Symbol | |
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| ID | 7399408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1324397 |
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| End bp | 1325359 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643708377 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002565975 |
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| Protein GI | 222479738 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.435553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT GGACCGCCGA GGAGATGCCG CGACTGGACG GGAAGACGGT GGTCGTCACC
GGCGCGAACA GCGGGCTCGG TTACGAGGGT ACGCGCGCGT TCGCCGCGAA GGGCGCCACG
GTGGTGATGG CGTGTCGGAG CGCCGAACGC GCCGAGACCG CGGCCGACGA GATCCGCGCC
GACGCCGGCG GCGACATCGA CGGCGAACTC GACGTGCGAG AGTGCGACCT CGCGTCGCTC
GACTCGGTGC GAGATTTCGC CGATAGGCTC GCCGCCGACT ACGACGCGGT CGACGTGCTC
TGTAACAACG CGGGCGTGAT GGCGATCCCC CGGAGCGAGA CCGAGGACGG CTTCGAGACG
CAGTTCGGCG TCAATCACCT CGGGCACTTC GCGCTCACCG GTCGCTTGTT CTCCCTTTTA
AAAGGTGCCG AGGGTATCGA CGGCGACGCG CGCATCGTCA CGCAGTCGTC GGGTGCCCAC
GAGCAGGGTG AAATGGACTT TTCAGACCTC AACTGGGAGG AGTCGTACGG CAAGTGGAAG
GCGTACGGTC GGAGCAAACT CGCGAACCTG CTGTTCGCCT ACGAGCTCCA GCACCGGATC
GACGCCGCGA ACCGCGAGGC CGACACGGGG GTCAACGTCC GCAGCGCTGC TTGCCACCCG
GGTTACACCG ACACCAATCT CCAGTTGCGC ACCGCCGCGG AGAGCGGGAA CCCCCTGCTG
AAGATCGGCA TGCGGCTGGC GAACGCTGTG CTCGGACAAG ACGCCGCGAT CGGGGCCGAA
CCGATGTTGT ACGCCGCGAC CGCCGACGTC GACGGCGGCG CCTACATCGA GCCCGGCGGG
CTGATGAACA TGCGCGGGCA CCCGACCGTG GGTCGGTCGA ACGACGCCTC CTACGACCGC
GATGACGCGC GGGAACTCTG GGAATACTCG ACAGAGGCCA CCGGCGTCGA TTTTTCGGTT
TAA
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| Protein sequence | MAEWTAEEMP RLDGKTVVVT GANSGLGYEG TRAFAAKGAT VVMACRSAER AETAADEIRA
DAGGDIDGEL DVRECDLASL DSVRDFADRL AADYDAVDVL CNNAGVMAIP RSETEDGFET
QFGVNHLGHF ALTGRLFSLL KGAEGIDGDA RIVTQSSGAH EQGEMDFSDL NWEESYGKWK
AYGRSKLANL LFAYELQHRI DAANREADTG VNVRSAACHP GYTDTNLQLR TAAESGNPLL
KIGMRLANAV LGQDAAIGAE PMLYAATADV DGGAYIEPGG LMNMRGHPTV GRSNDASYDR
DDARELWEYS TEATGVDFSV
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