Gene Hlac_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1287 
Symbol 
ID7399382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1296176 
End bp1296928 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID643708351 
Producthypothetical protein 
Protein accessionYP_002565949 
Protein GI222479712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGTCG TCGGCTACGA GTCGGGCGAA GGGTTCACCG TCGCCAGCGG CGGCGCGGTC 
GAGTTCGTCG AGGCGACCGC CGGTACGGAG CTCGCCTTCG GGCTCGGCGA CCGCCGCTGT
GCGGGAACCG TCCACAACGG CGAACATATC GCCTGCGACG CCGCCGACAC CCCTTACTGC
GATGCCCATG GGAGCGTCTG GGTCTGCGCC CGCTGTACGG GGACGTGTTT AAAAGACGAG
ATGGACTGCC ACGAGGAGCA CGCGGTGTAC CTCGCGGCGT TCGCGCCCGA CGTGTGGAAG
GTGGGCGTCA CGCGCCTGTG GCGGCTGGAG ACCCGGCTCC GCGAGCAGGG CGCCGACCGC
GCGGCTCACA TCCGGACGTA CCCGGACGGG CAGATCGCGC GCGAGGTCGA GGCCGAACTG
GCTGAGCGCG ACAATCTCGT CGATCGGGTA CGCGTCCCGA CGAAGCTCAG GGGATTCGGT
CGCAGCGTGG ACGCAGCGGC GTGGGAGTCG CTGCTGGACG GGTTCGATCC GATCGAGCGG
TTCGCGTTCG ATTACGGCCT CGACCTCGAC GACCGTCCCG TCGCGGAGAC GATGGCGGCC
GGGACGGTCC GAGGCTGGAA GGGGCGCGTG CTCGTGCTCG ATCGCGGCGG GTCGACCTAC
GCGGTCGACG CCCGCGATCT GGTCGGCTAC GAACTCACCG AGGAAGTGCC GGATCGAGAG
CTCCAGTCGA GTTTGGGCGC GTTCGGCGGG TGA
 
Protein sequence
MQVVGYESGE GFTVASGGAV EFVEATAGTE LAFGLGDRRC AGTVHNGEHI ACDAADTPYC 
DAHGSVWVCA RCTGTCLKDE MDCHEEHAVY LAAFAPDVWK VGVTRLWRLE TRLREQGADR
AAHIRTYPDG QIAREVEAEL AERDNLVDRV RVPTKLRGFG RSVDAAAWES LLDGFDPIER
FAFDYGLDLD DRPVAETMAA GTVRGWKGRV LVLDRGGSTY AVDARDLVGY ELTEEVPDRE
LQSSLGAFGG