Gene Hlac_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1260 
Symbol 
ID7399528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1272603 
End bp1273811 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content68% 
IMG OID643708324 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_002565922 
Protein GI222479685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGT CGCCCGTCGC CTACGTCGGC GTCTCCATCG CGGTCGGGTT GTCCTTCGGA 
ATTCTGCTCC AGAAGGCGCG GTTCTGTTTC GTCAGCGCCT TCCGCGACTT CGTCGCGTTC
AAAGACACCC GCGTGCTGAA GGGGCTGCTC GTCGGGATCG CGGTGATGAC CGTGTTCTGG
AGCGTGCAAG CGACGTTCGG CTACTTCCGC GGCTTCTGGA CGCCCGCGTG GGGGCTCGGA
TCGCTGTTCG GCGGGTTCGT CTTCGGGCTC GGGATGACCC TCGCCGGCGG CTGCGCGTCC
GGGACCCTCT ACCGCGCGGG ACAGGGGTAC CTCCAGTTCT GGCTCGTCCT CCTGTTCATG
TTCGTCGGCT ACGTCCTCTT CGCGTTCGCG TTCCCCGTGG CCGAGACGTA CTACTTCCAG
ACGCTGAACC CGTTCGAGGG GCAGACGCTG TACCTCTCCC TGCCGTTCTC GCCGGCGGTT
ATCGGGGTCG GCGCCGTCGC GCTCGGCACC CTCGCGTACG CGTTCGTGAA GGGTCGCAGT
CAGCTCCCCG ACGACCCCTC CGGCGGGACC GGCGTGGGGA CCGACACCCG CGCACAGGCG
GCGATCGGCG CCTCCCGGAC GCTCTCGGCC GTCTCGCTCG GGCTGCGCGG CATCGCCGAC
GGCACCGTCG AATACGGTCG TGCGCTCGCC AGCGACGACC GGCCGGTGAC GGTCCGGCTC
CGCGACTCGT GGGACGCGCG GACCGCGGGC GTGGCGATGG CGCTCGTCGC GAGCCTCTGG
TTCTACGTGC ACGGCCATTG GGCGATCACC GGCAGCGAGG CGCGCTGGGC CGGCTACCTG
TTGGCGGGGG CCGGATTCGA CGTGGCGAGC GTCGACTACT GGGGGTCGAT CCTGTTCCGC
GACGGCAACA TCTCGCTGAC CATCGACATG GTGATGATCG CGTCGCTGAT CGTCGGCTCG
TTCGTCGCCG CGTACGCCTC CGGCGACTTC CGGATCCGGA AGCCGAAGCT GAACCGGGTT
CCGAACTACG CGATCGGCGG GCTCCTGATG GGCGTCGGCT CGCGGCTCGC GGCCGGCTGC
AACATCGCGA ACCTCTTCTC GGGGATCGCG CTGCTGTCGG TACACTCCTT CATCGCCGGC
GCGGGGATCA TCCTCGGCGT CTACGTGATG ACCCACTACA TGTACCGCGA GGTCGGCTGC
GCGATTTAA
 
Protein sequence
MLLSPVAYVG VSIAVGLSFG ILLQKARFCF VSAFRDFVAF KDTRVLKGLL VGIAVMTVFW 
SVQATFGYFR GFWTPAWGLG SLFGGFVFGL GMTLAGGCAS GTLYRAGQGY LQFWLVLLFM
FVGYVLFAFA FPVAETYYFQ TLNPFEGQTL YLSLPFSPAV IGVGAVALGT LAYAFVKGRS
QLPDDPSGGT GVGTDTRAQA AIGASRTLSA VSLGLRGIAD GTVEYGRALA SDDRPVTVRL
RDSWDARTAG VAMALVASLW FYVHGHWAIT GSEARWAGYL LAGAGFDVAS VDYWGSILFR
DGNISLTIDM VMIASLIVGS FVAAYASGDF RIRKPKLNRV PNYAIGGLLM GVGSRLAAGC
NIANLFSGIA LLSVHSFIAG AGIILGVYVM THYMYREVGC AI