| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1204 |
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| Symbol | |
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| ID | 7399471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1211652 |
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| End bp | 1213550 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643708269 |
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| Product | membrane-flanked domain protein |
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| Protein accession | YP_002565868 |
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| Protein GI | 222479631 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000158592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000893365 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGCTCG CGCCCCAATC GGTCCCGTAC CGTGCGCTCC AGAAAGTGTC CGGGATCGTC
GTCCTCCTCT TTTTCATCGT GAACAACAAC CCCGACTGGG GGTTTGCGGT CGCGGCCGCC
ATCGTCGGCG CTGTCGTCCT CGCCGCGATC GCGTACGAGG TCGCGTACTA CCGGCGGTTC
GACTACGAGC TGACCGAGGA TACCCTCGAT ATCTCTTCCG GCGTGATCTC GCGGCGCGAG
CGGGAGATCC CCTACCGCCG GATCCAGAAC GTCGACGTGA GCCGGAGCGT GATCCAGCGG
GCGCTCGGCG TCGCTGCGGT GGATCTGGAG ACCGCCGGCG GCTCAAGCAC CGAGGGGTCG
ATCCGCTTCG TCACCCCCGA CGAGGCGACC CGGCTCCAGC GCGAGGTCCA GCGCCGCAAG
TCGGCCGGAT CGACCGGGCC GAACGGCGAG ACCGGAGCGG GAGCCGAGAC CGGAACCGGC
GACGAGACCG GGAGAAGAAC CGGCAGTGAG GCGGGCGCCG GGCCGGGCAG GGTCGGTCCC
GCAGAGGAGG AGCTGTTCGC GATCTCGCCG GGCGAACTCG CCTTAGTGGG GGCGCTGTCG
TTCGACGGCC GCCTCATCGG ATTGCTGGCG TTTTTGGGCT CCGGGTCGGT CCCGGTGCTT
TCCAGCTTCG TCCCGGACGC GTCGGCGATC GCGCTCACCG CGACCGCGAT TGTCGGCGTC
GGCGCGCTGT TCCTCGTGTC GTGGGTGCTC GGCGCGGGGG TCGCCTTCTC GAACTACTAC
GGGTTCCGGC TCTCCCGCGC CGGCGACGAG CTTCGGTACG AGCGCGGGCT GTTTCGCCGG
TACAGCGGTT CGATTCCGAC GGAGAAAGTG CAGGCGCTCC GGATCGCTGA TAATCCGGCG
AAGCGGGCGC TCGGCTACGC GAGCCTCTCG ATCGAGACCG CCGGCTACGC CCCCGGACAG
GGTGGCGAAC AGGGAAGTCA GGCAGCCGTC CCGATAGCGA CGACGGACCG GGTGTACCGG
CTGGCGCGCG AGGTCGAGTC GTTCGGCGAC CCGCGCTTTA CCCGCCCGCC CAAGCGGATC
CGATGGCGGT ACGCGTTCCG GTACGCGCTC GTCATCGGCG TCGTCGTCGC GGTCGCGTTC
GGGATCGACT GGTTCCTCGG CACCGGCGCC CCCTGGTACG CTCCGGCCGC ACTCCTGCTC
GCCGTGCCGC CGGCGGCCCA CCTGAAGTGG AAGCACCGCG GCTACTGGCT CGGAGAGGAC
CACCTCCTCA CCCGAAACGG GTTCTGGAGC CGCACGGTGA CCGTCGTCCC GTACTACCGG
ATCCAGAACG TCATCGATGC CCGGACCATC TTCCAGCGTC GCTGGGACGT GGCGACGATC
ATCGCCGACA CCGCCGGAAG CAGCTCTATC GCCGGCAACG ACGCCGCCGC CGTCGACTTC
GCGACCGACG AGGCGGTCGA CCTCCGCGAG ACCCTCCGAG AGCGGCTCCG CGTCGCCGTT
GCGAAGCACC GCGATCGACG GGACCGGTTC GAGTGGTTCG ACGGCGACGC GGAAGGATCC
GGTGAGATCG ACGATTCGAC TCCCGGTGTT GACGAGCCGA CAGCCGACGA CGAGACGACC
TCCGACGAGG ACGACGAAAG CCGGTCGGAT GTTCCGGACG ACGGCGTGAT CCGCCCCAAT
TTCTCGGGGA GCGACCGCGA CTACTCCGAG CCGGCCGAGC GGATCGACAC CGGCGAGTAC
GCGGTGGACC GCAGCCCGTC GGACATGGAC GGAGAGAGCG GAAGCGGAAC TGAAGAGGCA
GGTAGCGGCA ACGATGAGAG AGACGAAAAA GACGACATTG ACGATGCCGA GGACGGTGCG
GACAGCGCTG ACAACGACGC GAACGACGCC GAGAAATAG
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| Protein sequence | MKLAPQSVPY RALQKVSGIV VLLFFIVNNN PDWGFAVAAA IVGAVVLAAI AYEVAYYRRF
DYELTEDTLD ISSGVISRRE REIPYRRIQN VDVSRSVIQR ALGVAAVDLE TAGGSSTEGS
IRFVTPDEAT RLQREVQRRK SAGSTGPNGE TGAGAETGTG DETGRRTGSE AGAGPGRVGP
AEEELFAISP GELALVGALS FDGRLIGLLA FLGSGSVPVL SSFVPDASAI ALTATAIVGV
GALFLVSWVL GAGVAFSNYY GFRLSRAGDE LRYERGLFRR YSGSIPTEKV QALRIADNPA
KRALGYASLS IETAGYAPGQ GGEQGSQAAV PIATTDRVYR LAREVESFGD PRFTRPPKRI
RWRYAFRYAL VIGVVVAVAF GIDWFLGTGA PWYAPAALLL AVPPAAHLKW KHRGYWLGED
HLLTRNGFWS RTVTVVPYYR IQNVIDARTI FQRRWDVATI IADTAGSSSI AGNDAAAVDF
ATDEAVDLRE TLRERLRVAV AKHRDRRDRF EWFDGDAEGS GEIDDSTPGV DEPTADDETT
SDEDDESRSD VPDDGVIRPN FSGSDRDYSE PAERIDTGEY AVDRSPSDMD GESGSGTEEA
GSGNDERDEK DDIDDAEDGA DSADNDANDA EK
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