| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1187 |
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| Symbol | |
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| ID | 7399454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1193487 |
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| End bp | 1194404 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643708252 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002565851 |
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| Protein GI | 222479614 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0250538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000123969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAGCCC ACGCAGGGAC GCTCGGAACC GTCGCAGTCG CGGGCACGCT GGAACCGTTC
CTCGGCCCGC TGACCGGTCT CGTCGTCGAC GCCGCGATCT TCCTCGTCGT CGTCGTCGCG
ACATACGTGC TTTATAAGGC GGCGATCGCA CCGCTTGTCG GACGACTCTT CGACAGGCAG
GGTCTCGACG AGCACGCGCG GCGCCCGCTC CAGAAGATCG TCGCGTTCCT CGTGTTGTTC
GCGGGCGTCA CGGCCGCGTT CGGCGCGGCG GGGTATCAGG GGTTCCTGCG CTCGCTGGCG
ACGATCGCCG CCGCGGCGAC GCTCGCGATC GGCTTCGCGC TCCAGGACGT GATCAAGAAC
TTCGTCGCGG GCGTCTTTAT TTATACGGAC AGGCCGTTCC GCATCGGCGA CTGGATCGAG
TGGCAGGGGA ACTCGGGGGT CGTGGAGGAC ATCTCCTTCC GAGTCACTCG CGTGCGCACG
TTCGACAACG AACTGCTCAC GGTGCCGAAC CACACCCTGA CGAGCGATGT GGTGAAAAAC
CCCGTCGCGA AGAAGACGCT GCGCCTGAAG TTCGTCTTTG GGATCGACTA CGAGGACGAC
GTGGACAAAG CGACCGAGAT CATCGTCGAG GAGGCCGAGC GCAGCGACGC GATCTTGGAC
GATCCCGCTC CCTCGGTGCG GCTGACCGAG CTTGCCGACT CGTACGTCGG GCTCCAGTCG
CGGATCTGGA TCGACGACCC CTCACGGGCC GACTTCGTGA AGGCGCGCGC TGACTACGTG
AAGGCCGTTA AGGAGCGGTT CGACGAGGAA GGTATCTCGA TCCCGTTCCC GCAGCGCACC
GTCTCGGGGC GGAACGAGTG GGCTGAGCCC TCGTCGTTCA GTGCGATGGC GGAGGCCGGC
GTCGGCGGAG ACTCGTAG
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| Protein sequence | MGAHAGTLGT VAVAGTLEPF LGPLTGLVVD AAIFLVVVVA TYVLYKAAIA PLVGRLFDRQ
GLDEHARRPL QKIVAFLVLF AGVTAAFGAA GYQGFLRSLA TIAAAATLAI GFALQDVIKN
FVAGVFIYTD RPFRIGDWIE WQGNSGVVED ISFRVTRVRT FDNELLTVPN HTLTSDVVKN
PVAKKTLRLK FVFGIDYEDD VDKATEIIVE EAERSDAILD DPAPSVRLTE LADSYVGLQS
RIWIDDPSRA DFVKARADYV KAVKERFDEE GISIPFPQRT VSGRNEWAEP SSFSAMAEAG
VGGDS
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