| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1150 |
|---|
| Symbol | |
|---|
| ID | 7400959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1157666 |
|---|
| End bp | 1158538 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643708215 |
|---|
| Product | Proline dehydrogenase |
|---|
| Protein accession | YP_002565814 |
|---|
| Protein GI | 222479577 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0506] Proline dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.906847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCGC CCATCGCGAG CAACTTCGTC GCCGGCGAGA CGCCGGAGGC GGCGCTCGCG
CACGTCGAGT CCCTCAACGA CCGGGGCGTG GCCGGCATTC TGAACCTCCT CGGCGAGCAC
TACGCGGAAC GGCCCCCCGC CGACGCCGAC GCCGACGCGT ACGTCGACCT CGTCGAGTCG
ATCGCCGATC GGGGGATCGA CGCCTGCGTC TCCGTGAAGT CGAGCCAGAT CGGTCTCGAC
ATCGGCGACG ATGTGTTTCA GGAGAACCTC GCGCGCATCG TTGACGCGGC CAACGCCCCC
GCGGCGACGG GTCCCGACGG AACCGGCACG TTCGTCTGGA TCGACATGGA GGACCACGAG
ACCACCGACG TGACGCTCGA CGCGTTCGAG CGGCATGCGA TCGAGACCGA CGGGAACGTC
GGCGTCTGCG TGCAGGCGAA CCTGAAGCGC ACGCGTGAGG ACCTCGAACG CCTCGCCGAC
CTCCCCGGGA AGGTCCGGCT CGTGAAGGGA GCGTACGACG AGCCCGCCGC GATATCGTAC
AAAAAGAAGG CCCGCGTCGA CGAGTCGTAC CGCGACTGTC TCGCGTACAT GTTCGAGACC
TTCGACGACG GGGTCGCCGT CGGGAGCCAC GACCCCGCGA TGATCGAGTA CGCGAGCGAG
CTCCACGCGG AACACGGGAC GCCCTACGAG GTCCAGATGC TGATGGGCGT CCGTGAGGCG
GCGCAGTTCG ACCTCGCGGC CGACCCCGAC GTCGACGCCG AGGTGTACCA GTACATCCCG
TACGGCTCCA AGTGGTTCTC GTACTTCTAC CGGCGAATTC GGGAGCGGAA GTCGAACGCG
CTGTTCGCGC TGCGGGCGAT CGTCGGGCGC TGA
|
|---|
| Protein sequence | MIPPIASNFV AGETPEAALA HVESLNDRGV AGILNLLGEH YAERPPADAD ADAYVDLVES
IADRGIDACV SVKSSQIGLD IGDDVFQENL ARIVDAANAP AATGPDGTGT FVWIDMEDHE
TTDVTLDAFE RHAIETDGNV GVCVQANLKR TREDLERLAD LPGKVRLVKG AYDEPAAISY
KKKARVDESY RDCLAYMFET FDDGVAVGSH DPAMIEYASE LHAEHGTPYE VQMLMGVREA
AQFDLAADPD VDAEVYQYIP YGSKWFSYFY RRIRERKSNA LFALRAIVGR
|
|---|
| |