Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1125 |
Symbol | glpC |
ID | 7400934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1133113 |
End bp | 1134612 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708190 |
Product | sn-glycerol-3-phosphate dehydrogenase subunit C |
Protein accession | YP_002565789 |
Protein GI | 222479552 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAC ACACGGACGA CGAAGACGGG GGCGCAGAAG AGGGGAACGG GACGAACGGG ACGAACGGAG CGGGCGACCG CGACAACCCG GAAGCCCCCA GCCCCGGCGT CCCGGAGGCG GGCCGCGACG AGCAGCCGTC GATCTTCGTC CCCGACGACG GGGAGCCGAA GGAGACCGCC GCCACCGACG GCGGCGTCGA GAGCGCGACC GGCGGGAGCG ACTCGACCGA ACTCAATCCG GACGCGTACG ACCCGGTCGA CGTGTTCCCG GGCGGCGACC TCGACCTCCG GGAGGGCGCC GACTCCTGTT ACAAGTGCAC GAGCTGTGAC ACCTCCTGTC CGGTCGCCGA GGTCGACGAG GAGTTCCCGG GGCCGAAGTT CCAGGGGCCG GAACAGTGGC GGCTCAAGCG CAAGGAGGAC CACGACATCG ACGAGTCGAT CACCTCCTGT TCGAACTGCA TGCGCTGTGA CGACGCCTGT CCCTCCTCGG TGCCGCTCTC ACAGATGCAC AACGAGGCTC GCGGGCAGTT CGTCGAATCG CAGATGGAGA AGCTCTCGCG GGAGTACGTC CGGAACCGCA TCCTCTCGAA CTACCACTTT TTCGCGTCCA TCGCGAGCAA GGTGCCGCGG CTGGCGAACG CCGCGACGAA GATTCCGGGT GCGATGAAAC TCGGCGAGAA GGTCCTCGGA ATTGCGGGCG ACCGCGAGTT CCCGGACTTC GCCACCCAGA CGTTCCGCGA GTGGTGGAAG GCCCGCGGCG GCGCACAGGT GCAGAACCCC GACAAGCGCG TCGCCTACTT CCACGGCTGT TACTCCAACT ACAACACGCC GGAGGTCGGC AAGGCGATGG TACGGGTGTA CGAGCACTTC GGCTACGAGG TGATGGTGCC CCCGCAGAAG TGCTCGGGCA CGCCGATGTT CGCGAACGGG ATGCTGAAGG ACGCGCGCCG GCACGCGGAG ACGAACGTCG AGAACCTCGT CGAGGCGATC GGCGAGGGCG CCGACGTGAT CGCCTCCTGT ACCTCCTGTT CGCTGTCGCT GCGGCAGGAG TACCCCGAAC TGTTCGACAT CCACGGGATC GAAGACGTCT CCGACCACAC CTACGAGGCG CTCGAGTACC TCCGGATCAA CGAGGATCTG GAGGGCGAGC TGGCGGACAC GAAGCTCGCG GGCGAGCAGT CGTTCGCCTA CCACGCCCCG TGTCACGCAC GCAATCAGGG GCTCTCTCGA CAGGCCGTCG AGACGTTCCG CGACGTCGAC GGCGTCACCA TGGAGGACGT GGGCGACTCC TGTTCGGGTA TTTCCGGCAC CTACGGCTGG AAGGAAGAGA AGTACGAGAC GTCGATGGAG ATCGGCGCGG AGATGTTCGA GCACATGGAG GACGCCGAGG GCGACGTGGG AATGACCGAG TGCCCGACCT GCGCGATGCA GATGGAACAC GGCACCGGCT ACGAGGTCGA GCACCCGCTC CAGCTGCTCG AGGACGCGGT CGGCTCGTAG
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Protein sequence | MTRHTDDEDG GAEEGNGTNG TNGAGDRDNP EAPSPGVPEA GRDEQPSIFV PDDGEPKETA ATDGGVESAT GGSDSTELNP DAYDPVDVFP GGDLDLREGA DSCYKCTSCD TSCPVAEVDE EFPGPKFQGP EQWRLKRKED HDIDESITSC SNCMRCDDAC PSSVPLSQMH NEARGQFVES QMEKLSREYV RNRILSNYHF FASIASKVPR LANAATKIPG AMKLGEKVLG IAGDREFPDF ATQTFREWWK ARGGAQVQNP DKRVAYFHGC YSNYNTPEVG KAMVRVYEHF GYEVMVPPQK CSGTPMFANG MLKDARRHAE TNVENLVEAI GEGADVIASC TSCSLSLRQE YPELFDIHGI EDVSDHTYEA LEYLRINEDL EGELADTKLA GEQSFAYHAP CHARNQGLSR QAVETFRDVD GVTMEDVGDS CSGISGTYGW KEEKYETSME IGAEMFEHME DAEGDVGMTE CPTCAMQMEH GTGYEVEHPL QLLEDAVGS
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