Gene Hlac_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1119 
Symbol 
ID7400928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1124787 
End bp1125470 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content71% 
IMG OID643708184 
ProductSPP-like hydrolase 
Protein accessionYP_002565783 
Protein GI222479546 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01482] Sucrose-phosphate phosphatase subfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.660919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCGC CCCTCGCGTT GGACATCGAC GGGACGTTGA CGACGGCGAG CGGCCGGCTC 
GACGCCCGCG TCTTCGAGTT GTTGCCCGAC TGGGACGCCC CGGTGGTGCT AGCGACCGGG
AAGGCGTTTC CGTATCCGGT CGCGCTGGCG CACTTCCTCG GGCGCGCGGA GACCGTCATC
GCCGAAAACG GCGGCGTCGT GCACGTCGAC GGTGAGACGG CGATCCTCGG CGACGCCGAG
GCCCCGCGGG CCGTCGTCGA AGCGTTCCGC GAGCGCGGCG GCGACCCCGG CTGGGGCGCC
CGTGACACGG TGAATCGCTG GCGCGAGACC GAGGTAGCGC TGTCGCTCGA CGCCGACGAG
GCGCTGCTGC GCGAGGTCGC CGCGGCCGCC GGCGGCGACG TGGAGGTCGT CGACACCGGC
TACGCGTACC ACGTCAAATC GACCGGCGTG AGCAAGGGTC GCGGGCTCGA ACGCGTCGGC
GACGCCCTCG GTATCGGTCC CGACGAATTC GTCGCGATCG GTGACAGCGA AAACGACGTG
TCCACCTTCG CGGTCGCCGG CGAGTCGTAC GCGGTCGCCA ACGCCGACGG CGCCGCTCGC
GAGGCTGCCG ATATCGTGGT AGCGGACTCG TACATGGACG GCACCGCCGG CGTGCTCGCC
GATCTTCGGA CGCGGACTGA GTAG
 
Protein sequence
MVPPLALDID GTLTTASGRL DARVFELLPD WDAPVVLATG KAFPYPVALA HFLGRAETVI 
AENGGVVHVD GETAILGDAE APRAVVEAFR ERGGDPGWGA RDTVNRWRET EVALSLDADE
ALLREVAAAA GGDVEVVDTG YAYHVKSTGV SKGRGLERVG DALGIGPDEF VAIGDSENDV
STFAVAGESY AVANADGAAR EAADIVVADS YMDGTAGVLA DLRTRTE