| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1080 |
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| Symbol | |
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| ID | 7400152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1080575 |
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| End bp | 1081750 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643708146 |
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| Product | Nucleotidyl transferase |
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| Protein accession | YP_002565745 |
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| Protein GI | 222479508 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.380619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CTCCCGTGAC TGCGGTGGTC CTCGCCGCGG GCGAGGGACG GCGGTTAGAA
CCGCTGACGA ACCGGCGGCC GAAGCCGATG GTCCCCGTGG CGAACCGTCC GCTGCTCGAA
CACGTCGTTG AGGCCGTCGC CGCGGCCGGG ATCAATCGGA TCGCCCTCGT CGTCGGGTAC
AGACAGGAGC GCATCCGGAA CCACTTCGGC GACGGCGACG ACTGGGGCGT GACGATCGAG
TACGTCGAGC AGTCGACCCA ACTGGGAACC GGTCACGCCG TCTTGCAGGC CGAGCCCGTC
GTCGACGGCC CCTTCGTCGT GCTCAACGGC GACCGGATCG TCGACGCCGC GGTCGTCTCG
CGGGTCCGTG ATCTCGCGCG CGACGGCGAC CACCCGGCGA TGGCGGTCAC GACCGCGGAA
CGCCCGCGCG AGTACGGCGT GGTAACACTC GATGGTGACC GGGTGACGGG GATCGACGAG
AAGCCCGAGG GGCCGGTTGA GACGAACCGG ATCAACGCCG GCGTCTACGC CTTCTCGCCG
GCCGTGTTCG ACGCGATCCG CGAGACGCAC ACGACGGGCG AACTGGCGAT CACGGCGACG
CTCAACGAGC TCGCGTCGGC GGGCGACCTG ACCGCGGTCG GGTACGATGG CCGCTGGCTC
GACGTATCGA ACCTTTGGGA CCTGCTGGGT GTCAACGCCG CGCTGATCGG TGAGTCCGAA
CAGACGGAGC CTACCGACGC CGCCTTCGGC GCGTCGGTGA CCGTCGCCGA CGACGTGGCG
CTCGCGGGCA ACGTCCGAAT CGGACCGAAC GTCACGGTCG GCGGGAGCAC CGCGATCGGG
AGCAACGCGA CGATCGAGGC GGGAGCGGTC GTCGAGAACG CGGTGATCTT CCCCGACGCC
GTGATCGGTG CCGGAGCCGT CGTCCGCGAC GCGATCGTCG CCGGGAACGC CCGAATCGGG
GCGAACGCGA CGATCGCCGG GGGTCCTGCG ACCGTCGTCG TGGGCGATGC GGTCCACCAC
GACGTGGCAC TCGGCGGCGT GGTCGGCGAC AACACGACCG TCGGCGGCGG CGCGACGCTC
ACGGACGGTG CGGTCGTCGG CGACGACGTG CGGGCCGACG CCGGCGTCGT GATCGACGGG
CGCGTTGAAT CTGGCGCGGT CGTCCGGAGG GGGTAA
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| Protein sequence | MSDTPVTAVV LAAGEGRRLE PLTNRRPKPM VPVANRPLLE HVVEAVAAAG INRIALVVGY
RQERIRNHFG DGDDWGVTIE YVEQSTQLGT GHAVLQAEPV VDGPFVVLNG DRIVDAAVVS
RVRDLARDGD HPAMAVTTAE RPREYGVVTL DGDRVTGIDE KPEGPVETNR INAGVYAFSP
AVFDAIRETH TTGELAITAT LNELASAGDL TAVGYDGRWL DVSNLWDLLG VNAALIGESE
QTEPTDAAFG ASVTVADDVA LAGNVRIGPN VTVGGSTAIG SNATIEAGAV VENAVIFPDA
VIGAGAVVRD AIVAGNARIG ANATIAGGPA TVVVGDAVHH DVALGGVVGD NTTVGGGATL
TDGAVVGDDV RADAGVVIDG RVESGAVVRR G
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