Gene Hlac_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1030 
Symbol 
ID7400101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1022165 
End bp1022815 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content70% 
IMG OID643708097 
ProductMethyltransferase type 11 
Protein accessionYP_002565697 
Protein GI222479460 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.740234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCCC AGTCCGCCGG CGACCCCCAG TCGACGTACG ACCGGATCGC CGCGCACTTC 
TCGAAGACGA GGGAGTACGC GTGGCCGGAG GTCGAGTCGT TCCTCGACGG GCGCACCGCG
ACGCGCGGGC TCGACATCGG CTGCGGCAAC GGGCGGCACA CGGAACTGCT CGCCGAGCGC
GCGGACGCGG TCGTCGGCGT CGACCTCAGC CGCGAGCTCC TCCGTGAGGC GGTCGCTCGT
GCCCGCGAAC GGGGGTACGA CGGGACCGCG TCGTTCGTCC ACGGCGACGC CGCGACCCTC
CCGATCGCGA CCGATGCGGT CGGGGTCGCC GTGTACGTCG CGACCCTCCA CCACCTCCCG
TCGCGCGAGG CTCGGGTCCG GAGCCTCGAC GAACTCGCGC GAGTCCTCGC GCCCGGCGGG
ACTGCGCTGG TGAGCGCATG GAGTACGGCT CACGACCGGT TCGACCGAGA AGAGGGGTTC
GACACGACGG TCGACTGGAC CCTCCCCGGC GGCGAAACGG TCCCGCGGTA CTATCACATC
TACTCGCCCG CTGAGTTCGA GATCGACCTC GGCGAAAGCG CCCTCAGCGT CGTCGATGTC
GATATTTCCA GCGGGAACTG CTATGCAACC GTCACCGCCT CGGACGCCTA A
 
Protein sequence
MDPQSAGDPQ STYDRIAAHF SKTREYAWPE VESFLDGRTA TRGLDIGCGN GRHTELLAER 
ADAVVGVDLS RELLREAVAR ARERGYDGTA SFVHGDAATL PIATDAVGVA VYVATLHHLP
SREARVRSLD ELARVLAPGG TALVSAWSTA HDRFDREEGF DTTVDWTLPG GETVPRYYHI
YSPAEFEIDL GESALSVVDV DISSGNCYAT VTASDA