| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0998 |
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| Symbol | |
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| ID | 7401893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 991735 |
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| End bp | 993237 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643708064 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002565665 |
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| Protein GI | 222479428 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.280475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCGCC TCCCGAACCC GTTCCGTGCG CTAATCTTAT ACATCGGCTT CGCCCTCGCG
AGGGCGGGGC TGATCGACCG TCACCGCGTG GTCCGGACGA CGGACCTCGC GTGGCCGCGG
ATCGTCACGG GGATCGCCCG GATGTCGAAG AACGCGGTCG ACGTGGCGAT GGTCGGCGTC
GCCGTCGGCA CCAGCGCGGT CGCCGGCGTC GGCTTCGCCG GCCCCTACTG GGGGCTCGCG
TTCGCGCTCG GCGGCGGCGT CGCCGGCGGC ACCATCGCCT TAGTCTCCCA GCGGTTCGGC
GCGGAGGCGT ACGCGGAACT GGGCGACGCC GTCCGGGCGA GCGTCCTCCT CGCTATCGTG
ATCACGATCC CCGTCTCGGT CACCTTCTGG ACGTTCCCGA CGCGTTTCAT CGACGTGTTG
AGCAGCAACG AGGCCGCGAT CGCGTTCGGC GCCGACTACC TCCGGATCGT CGGGCTCGGC
GTTCCATTCG CCGCGCTCAA CCTCGTCGGC AGCCGGGTGC TGGTCGGCTG CGACGACGCC
TACACCGCGA TGCAGGTTCG AGCCGGCGGC GCGATCGCGA ACATCGTGCT CAGCGCCGCG
TTCATCTTCG GGCTGGGGTG GGGCGTCGAG GGCGCCGCGC TCGGTACCGT CCTCTCGAAC
GTGCTCGCCG TCGCCGCGTT CGCGGTCGGG CTCCTGCGGG GGCGACTCCC CGGAATGGGC
GAGTTCCCGA TCGCGATCGA CCCGTTCGGC TCGTACGTGA ACCCGGACAT GCTCCACGAC
CTCGTCGAGA TCGGGGTTCC GGTCGGCGCG CGCAACCTCG TGTGGACGGC CGCGGAGTTC
CCAATGCTCG CCATCCTCGA CGTGTTCGGC GAGAACACCG TCGCCGCGTT CGTCATCGCC
CGGCGTATCT GGGGGATCAT GAACGCCCCC GGCTGGGGCT TCGGGCTCGC CTCCTCCAGT
CTGGTCGGGC AGGAGCTCGG CGGCGAGGAC CCCGCAGAGG CGGAGGCGTA CGCCCGCGAC
ATCATCCGCT TTTCCGTGGC GACGTACGTG GTCTTCGCGG CGCTGACGGC CGTCTTCGCA
GGCGACATCG TGGCGCTGTT CGCGGAGAGC CCGGAGAGCC CCGAGGTGCC GATCGCGATC
ACGTTCGTGT ACGCGGCCTG CGTCGCCGTC GTCTTCCAGG GGATCTCGGG TGGAGCGGCG
GGGCCGCTCG ACGCGGCCGG CGACACGAAG ATCCCCTTCG CGAGCCAGTT CCTCGGCATG
TTCTGCGTGT CGATTCCGCT GGCGTACGTC GGGGCGTACG AGGCGACGCC CGCCATCGAC
GTGCCGGGGC TCGGCGTGAC GATCCCGGAG ATCGCGCTCC CCGCGATCGG GCTGTGGGGC
GTGTACTTGG CGTTCGTCGC CGAGACGACG ATCCCCGCCG CGATCAACTA CTGGCGGTTC
CGGTCCGGGA AGTGGAAGGC GATCAGCGAG GCGTACCGGC CGGACGCTCC CGTGGACGAC
TAA
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| Protein sequence | MARLPNPFRA LILYIGFALA RAGLIDRHRV VRTTDLAWPR IVTGIARMSK NAVDVAMVGV
AVGTSAVAGV GFAGPYWGLA FALGGGVAGG TIALVSQRFG AEAYAELGDA VRASVLLAIV
ITIPVSVTFW TFPTRFIDVL SSNEAAIAFG ADYLRIVGLG VPFAALNLVG SRVLVGCDDA
YTAMQVRAGG AIANIVLSAA FIFGLGWGVE GAALGTVLSN VLAVAAFAVG LLRGRLPGMG
EFPIAIDPFG SYVNPDMLHD LVEIGVPVGA RNLVWTAAEF PMLAILDVFG ENTVAAFVIA
RRIWGIMNAP GWGFGLASSS LVGQELGGED PAEAEAYARD IIRFSVATYV VFAALTAVFA
GDIVALFAES PESPEVPIAI TFVYAACVAV VFQGISGGAA GPLDAAGDTK IPFASQFLGM
FCVSIPLAYV GAYEATPAID VPGLGVTIPE IALPAIGLWG VYLAFVAETT IPAAINYWRF
RSGKWKAISE AYRPDAPVDD
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