Gene Hlac_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0995 
Symbol 
ID7401890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp987151 
End bp989088 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content65% 
IMG OID643708061 
ProductDNA gyrase, B subunit 
Protein accessionYP_002565662 
Protein GI222479425 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGC AGAGCGAATA CGGAGCCGGC CAGATCCAGG TCCTCGAAGG CCTGCAGGCC 
GTCCGTAAAC GTCCGGCGAT GTATATCGGG TCCACGGACG GTCGGGGGCT CCACCATCTC
GTCTACGAGG TCGTCGACAA CTCCATCGAT GAGGCGCTCG CGGGGTACTG CGACGATATC
ACGGTCACGA TCCACGACGA CAACTCCGTC AGCGTCAGCG ACGACGGTCG AGGGATCCCG
GTCGACATCC ACGAGAAGTA CGACCGCCCG GCGCTCGAAG TGATCATGAC CATTCTCCAC
GCCGGCGGGA AGTTCGACTC CAAGTCCTAC CAGGTCTCTG GGGGACTCCA CGGCGTCGGC
GTCAGCGTCG TCAACGCCCT CTCCGAGCGG CTGGAGGTCG AGGTGAAACG CGACGGCGGC
GTCTACCGTC ACGAGTTCGC CCGCGGCGAG CCCGCCGAGG ACGGCTTCGA GCGCGTTCGC
GACCTCAACG ACGACGAAGA GACGGGCACG TACATCCGAT TTTGGCCCGA CGAGGAGATC
TTCGAGACCA CCGCCTTCGA GTTCTCGACG CTCGCCAGCC GCCTGCGTGA GCTGGCGTTC
CTCAACTCCG GCGTCGCCGT CACCCTGATC GACGAGCGCG ACGAGGAGGG CGTCGACGAC
GCTGGCGACG AGGAGACGTT CCGCTACGAG GGCGGCATTC GGGAGTTCGT CGGCTACCTC
AACGAGGCGC GGACGCCGAT CCACGACGAG GTCATCTACT TCGAAGACGA GGACGACGAC
ATCCACGTCG AGGTCGCGAT GCAGGCGACC GAGGAGCTGC AGGGCTCCGT CCACGCGTTC
GCGAACAACA TCAACACCCG CGAGGGCGGC ACCCACCTCA CCGGCTTCAA GACCGCCCTG
ACCCGGACCG TCAACGACTA CGCCAACACT CACGGGCTCG TCGACGACCT CGAGGCGAAC
CTCAAAGGCG AAGATGTGCG CGAGGGGCTC ACGGCGGTCA TCTCGGTGAA ACATCCCGAC
CCGCAGTTCG AGGGGCAGAC GAAGACGAAG CTCGGCAACA GCGAGGTCCG CGGCATCGTC
GAGTCCGCCA CCCACGACAA GCTCGGGACC TTCTTCGAGG AGAATCCCGA CACCGCCCGG
AAAGTCGTCC ACAAGGCCGC GGAGGCCGCG CGGGCGCGCA AGGCGGCGAA GAAGGCCGAA
GAGCTGACCC GGCGCAAGTC CGCGCTGGAG TCGACGGCGC TGCCGGGCAA GCTCGCCGAC
TGTCAGACCC GCGACCCGGA AGAGGCGGAG CTGTTCGTCG TCGAGGGCGA CTCCGCGGGC
GGCTCGGCCA AGCAGGGCCG AAATCGGAAG AACCAGGCGA TCCTCCCGCT TAAAGGGAAG
ATCCTCAACG TCGAGAAACA CCGGCTCGAC CGGATTCTCG AAAACGACGA GATCCGCGCG
CTGATCACCG CGATCGGCGC GGGAATCGGT GAGGAGTTCG ACATCGACGA TGTCCGGTAC
AACAAGATTA TCATCATGAC GGACGCCGAC GTCGACGGCG CCCACATCCG GACGCTGCTT
CTCACGCTCC TGTACCGCCA CATGAAGCCC CTGCTCGAAG CGGGCTACGT GTACGCGGCC
CAGCCCCCGC TGTACCGCGT CCGGTACCGC GGCGAGACGT ACGACGCGAT GACCGAGGCG
GAGCGCGACC GGATCGTCGC GGAAGAGTGC GACGGGAACC CCGCCCAGGT CCAGCGATTC
AAGGGCCTCG GCGAGATGAA CCCCGATCAG CTGTGGGATA CGACGATGGA CCCCGAGAAC
CGGCGGCTCA AGCGGATCAA CATCGACGAC GCGGCCGCCG CCGACCGCAT GTTCAATGTG
TTGATGGGTG ACGCGGTCGA GCCGCGCAAG CAGTTCATCA AAGAGCACGC CACCGAGGCG
GAGTGGGTGG ATATATGA
 
Protein sequence
MSEQSEYGAG QIQVLEGLQA VRKRPAMYIG STDGRGLHHL VYEVVDNSID EALAGYCDDI 
TVTIHDDNSV SVSDDGRGIP VDIHEKYDRP ALEVIMTILH AGGKFDSKSY QVSGGLHGVG
VSVVNALSER LEVEVKRDGG VYRHEFARGE PAEDGFERVR DLNDDEETGT YIRFWPDEEI
FETTAFEFST LASRLRELAF LNSGVAVTLI DERDEEGVDD AGDEETFRYE GGIREFVGYL
NEARTPIHDE VIYFEDEDDD IHVEVAMQAT EELQGSVHAF ANNINTREGG THLTGFKTAL
TRTVNDYANT HGLVDDLEAN LKGEDVREGL TAVISVKHPD PQFEGQTKTK LGNSEVRGIV
ESATHDKLGT FFEENPDTAR KVVHKAAEAA RARKAAKKAE ELTRRKSALE STALPGKLAD
CQTRDPEEAE LFVVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKHRLD RILENDEIRA
LITAIGAGIG EEFDIDDVRY NKIIIMTDAD VDGAHIRTLL LTLLYRHMKP LLEAGYVYAA
QPPLYRVRYR GETYDAMTEA ERDRIVAEEC DGNPAQVQRF KGLGEMNPDQ LWDTTMDPEN
RRLKRINIDD AAAADRMFNV LMGDAVEPRK QFIKEHATEA EWVDI