Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0995 |
Symbol | |
ID | 7401890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 987151 |
End bp | 989088 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643708061 |
Product | DNA gyrase, B subunit |
Protein accession | YP_002565662 |
Protein GI | 222479425 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGAGC AGAGCGAATA CGGAGCCGGC CAGATCCAGG TCCTCGAAGG CCTGCAGGCC GTCCGTAAAC GTCCGGCGAT GTATATCGGG TCCACGGACG GTCGGGGGCT CCACCATCTC GTCTACGAGG TCGTCGACAA CTCCATCGAT GAGGCGCTCG CGGGGTACTG CGACGATATC ACGGTCACGA TCCACGACGA CAACTCCGTC AGCGTCAGCG ACGACGGTCG AGGGATCCCG GTCGACATCC ACGAGAAGTA CGACCGCCCG GCGCTCGAAG TGATCATGAC CATTCTCCAC GCCGGCGGGA AGTTCGACTC CAAGTCCTAC CAGGTCTCTG GGGGACTCCA CGGCGTCGGC GTCAGCGTCG TCAACGCCCT CTCCGAGCGG CTGGAGGTCG AGGTGAAACG CGACGGCGGC GTCTACCGTC ACGAGTTCGC CCGCGGCGAG CCCGCCGAGG ACGGCTTCGA GCGCGTTCGC GACCTCAACG ACGACGAAGA GACGGGCACG TACATCCGAT TTTGGCCCGA CGAGGAGATC TTCGAGACCA CCGCCTTCGA GTTCTCGACG CTCGCCAGCC GCCTGCGTGA GCTGGCGTTC CTCAACTCCG GCGTCGCCGT CACCCTGATC GACGAGCGCG ACGAGGAGGG CGTCGACGAC GCTGGCGACG AGGAGACGTT CCGCTACGAG GGCGGCATTC GGGAGTTCGT CGGCTACCTC AACGAGGCGC GGACGCCGAT CCACGACGAG GTCATCTACT TCGAAGACGA GGACGACGAC ATCCACGTCG AGGTCGCGAT GCAGGCGACC GAGGAGCTGC AGGGCTCCGT CCACGCGTTC GCGAACAACA TCAACACCCG CGAGGGCGGC ACCCACCTCA CCGGCTTCAA GACCGCCCTG ACCCGGACCG TCAACGACTA CGCCAACACT CACGGGCTCG TCGACGACCT CGAGGCGAAC CTCAAAGGCG AAGATGTGCG CGAGGGGCTC ACGGCGGTCA TCTCGGTGAA ACATCCCGAC CCGCAGTTCG AGGGGCAGAC GAAGACGAAG CTCGGCAACA GCGAGGTCCG CGGCATCGTC GAGTCCGCCA CCCACGACAA GCTCGGGACC TTCTTCGAGG AGAATCCCGA CACCGCCCGG AAAGTCGTCC ACAAGGCCGC GGAGGCCGCG CGGGCGCGCA AGGCGGCGAA GAAGGCCGAA GAGCTGACCC GGCGCAAGTC CGCGCTGGAG TCGACGGCGC TGCCGGGCAA GCTCGCCGAC TGTCAGACCC GCGACCCGGA AGAGGCGGAG CTGTTCGTCG TCGAGGGCGA CTCCGCGGGC GGCTCGGCCA AGCAGGGCCG AAATCGGAAG AACCAGGCGA TCCTCCCGCT TAAAGGGAAG ATCCTCAACG TCGAGAAACA CCGGCTCGAC CGGATTCTCG AAAACGACGA GATCCGCGCG CTGATCACCG CGATCGGCGC GGGAATCGGT GAGGAGTTCG ACATCGACGA TGTCCGGTAC AACAAGATTA TCATCATGAC GGACGCCGAC GTCGACGGCG CCCACATCCG GACGCTGCTT CTCACGCTCC TGTACCGCCA CATGAAGCCC CTGCTCGAAG CGGGCTACGT GTACGCGGCC CAGCCCCCGC TGTACCGCGT CCGGTACCGC GGCGAGACGT ACGACGCGAT GACCGAGGCG GAGCGCGACC GGATCGTCGC GGAAGAGTGC GACGGGAACC CCGCCCAGGT CCAGCGATTC AAGGGCCTCG GCGAGATGAA CCCCGATCAG CTGTGGGATA CGACGATGGA CCCCGAGAAC CGGCGGCTCA AGCGGATCAA CATCGACGAC GCGGCCGCCG CCGACCGCAT GTTCAATGTG TTGATGGGTG ACGCGGTCGA GCCGCGCAAG CAGTTCATCA AAGAGCACGC CACCGAGGCG GAGTGGGTGG ATATATGA
|
Protein sequence | MSEQSEYGAG QIQVLEGLQA VRKRPAMYIG STDGRGLHHL VYEVVDNSID EALAGYCDDI TVTIHDDNSV SVSDDGRGIP VDIHEKYDRP ALEVIMTILH AGGKFDSKSY QVSGGLHGVG VSVVNALSER LEVEVKRDGG VYRHEFARGE PAEDGFERVR DLNDDEETGT YIRFWPDEEI FETTAFEFST LASRLRELAF LNSGVAVTLI DERDEEGVDD AGDEETFRYE GGIREFVGYL NEARTPIHDE VIYFEDEDDD IHVEVAMQAT EELQGSVHAF ANNINTREGG THLTGFKTAL TRTVNDYANT HGLVDDLEAN LKGEDVREGL TAVISVKHPD PQFEGQTKTK LGNSEVRGIV ESATHDKLGT FFEENPDTAR KVVHKAAEAA RARKAAKKAE ELTRRKSALE STALPGKLAD CQTRDPEEAE LFVVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKHRLD RILENDEIRA LITAIGAGIG EEFDIDDVRY NKIIIMTDAD VDGAHIRTLL LTLLYRHMKP LLEAGYVYAA QPPLYRVRYR GETYDAMTEA ERDRIVAEEC DGNPAQVQRF KGLGEMNPDQ LWDTTMDPEN RRLKRINIDD AAAADRMFNV LMGDAVEPRK QFIKEHATEA EWVDI
|
| |