Gene Hlac_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0979 
Symbol 
ID7401873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp971893 
End bp972216 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content65% 
IMG OID643708045 
Productsmall multidrug resistance protein 
Protein accessionYP_002565647 
Protein GI222479410 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGGA TTATCCTCTT CGTCGCCGGC CTGTTTGAGA TCGCGTGGGC GATCGGCCTC 
GAGTACTCTG ACGGTTTTTC GGAGCCGATC CCGACGGCAG GCACCGTCGT CGCGCTCGTC
ATCAGCATGG CGTTGCTCGG GAAGGCGGTA CAGGACCTCC CTATCGGGAC CGCCTACGCC
GTGTGGACCG GGATCGGCGC CGTCGGGACC GCGTCGCTCG GAATCGTCCT GTTCGACGAG
CCGGCGACGG GCGCTCGCCT CCTCTTTATC TCCGTGATCG TCTTCGGAAT CGTCGGGCTC
CACCTCGTCT CCGGCGGCCA CTGA
 
Protein sequence
MSWIILFVAG LFEIAWAIGL EYSDGFSEPI PTAGTVVALV ISMALLGKAV QDLPIGTAYA 
VWTGIGAVGT ASLGIVLFDE PATGARLLFI SVIVFGIVGL HLVSGGH