Gene Hlac_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0882 
SymbolbtuD 
ID7401252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp874129 
End bp875403 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content73% 
IMG OID643707947 
Productcorrinoid ABC transporter ATPase 
Protein accessionYP_002565550 
Protein GI222479313 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTG AACAGTCTCC CGCCGGCGAC ACCGATCCGT CGCCGGTCGC CGCCGAGATC 
CCCCCGATCG AGGTCAGCGA CCTGTCGGTC TCTTTCGGTG ACGTACCGGT CGTCTCGGGG
GTCGATCTTC GGGTCGAGCG CGGGTCGATC GTGGGGCTCG TCGGCCCGAA CGGTGCGGGG
AAGACGACCG TCCTCCGGGC GATCAAGGGG ACGCTCTCGC CCGGCGCCGG CGAGGTCCTG
CTCGACGGTG ACCCCGCCGA GTCGCTGTCC GCGCGCGAGG CCGGACGGCG GGTCGCCAGC
GTCCCGCAGG AGACGAGTCT CGCGTTCGAC TTCCGGGTGC GGCAGATCGT CGAGATGGGA
CGGACGCCGC ACCTCGGGCG GTTCGACGGC CACGGCCCCG ACGACGAGCG TGCGGTCCGC
GAGGCCATGG ACGCCGGGGG CGTCGCGCGC TTCGCCGACC GAGCGATCAC CGAGGTCTCC
GGGGGCGAGC GCCAGCGGGT CCTGCTGGCC CGGGCGCTGG CACAGGAAAC CCCGTCGTTG
CTGCTTGACG AGCCAACGGC CAGCCTCGAC GTGAATCACG CGGTCCGGAC CCTCGAACTC
GTCAGGCGGC TCGTCGACGA CGGGCGCGCC GCGCTCGCGG CGATCCACGA CCTCGACATG
GCCGCGCGGT ACTGCGACGA GATTGTCGTC CTCGCGAACG GCGGCGTCCG GGCCGCCGGC
CCGCCCGAGG ATGTGTTGAC GGCGGGGACG CTCCGGGACG CGTTCGACGC CGAGGCGTTC
GTCGGCGAGA ATCCGGCGAC GGGATCGCCG ACGGTCACCG CGTTCGACGG GGGCGGCGGG
GGCGACTCGG CCGACTCGGC CGAACTGGCA GAGTTGCTCC GGATCCACGT CGTCGGGAGC
GGTCAACCAG CAGGGCGGGC CGTCGCGCGA CTGGCCGCGG CGGGTCACGC CGTCTCCGTC
GGCGTCATTC CCGAGGGCGA CGCGGCCGCT GGGATCGCTG CCGACGCGGA TGCGCAGATC
GTGACGGCGC CTCCGTTCGC GGCGGTCCCG CCCGAACGGC GGGCCGAGGC GGTCGTCTTC
GCGCGGGAGG CCGACGTGAC GGTCGCGGTC GGGGAGGCGG GGAAAGCGGG ATCAGAAGCA
GGCGGCGAAA CCGCAGCGAA CGCAGCGGTA TTGACCGCAA GCGACCGAAT CGCACACGTG
GACGACACAT TTGACGACGG CGAACTGCTC GACGCGGTAC GCGGGAGAAC TGCGGACACC
GCGCCGGACC GATAA
 
Protein sequence
MTAEQSPAGD TDPSPVAAEI PPIEVSDLSV SFGDVPVVSG VDLRVERGSI VGLVGPNGAG 
KTTVLRAIKG TLSPGAGEVL LDGDPAESLS AREAGRRVAS VPQETSLAFD FRVRQIVEMG
RTPHLGRFDG HGPDDERAVR EAMDAGGVAR FADRAITEVS GGERQRVLLA RALAQETPSL
LLDEPTASLD VNHAVRTLEL VRRLVDDGRA ALAAIHDLDM AARYCDEIVV LANGGVRAAG
PPEDVLTAGT LRDAFDAEAF VGENPATGSP TVTAFDGGGG GDSADSAELA ELLRIHVVGS
GQPAGRAVAR LAAAGHAVSV GVIPEGDAAA GIAADADAQI VTAPPFAAVP PERRAEAVVF
AREADVTVAV GEAGKAGSEA GGETAANAAV LTASDRIAHV DDTFDDGELL DAVRGRTADT
APDR