Gene Hlac_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0584 
Symbol 
ID7401719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp603119 
End bp603694 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content69% 
IMG OID643707649 
Productorotate phosphoribosyltransferase 
Protein accessionYP_002565256 
Protein GI222479019 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.306687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCG ACGCGCGCTG TCTCGGTATG ACCGACGACG AGCGACGGAG CGAGCTCATC 
GCCGCGCTGC GGGCGGCCGA CGCCGTCCGG TTCGGCGAGT TCGAGCTCTC ACACGGCGGG
ACCAGCGACT ACTACGTCGA CAAGTACCTG TTCGAGACTG ATCCGGACGC GCTCCGGCTC
GTGAGCGAGG CGTTTGCTGA TCGCCTCGCC GACACGGACG CGAAACTTGC GGGCGTCGCG
CTGGGCGCGG TCCCACTCGT GGCCGTCACG GCGACGGAAC TGGGTCGCCC GTACGTCATC
GCGCGCAAGC AGGCGAAGGA GTACGGCACC GGTAACCGCA TCGAAGGTCG ACTCGACGAG
GGCGAGGAGG TCGTCGTACT GGAGGACATC GCCACGACCG GGCAGTCCGC GGTCGACGCC
GTCGAAGCGC TGCGCGAGGC GGGTGCGACG GTGAACCGCG TGCTCGTCGT CGTCGATCGC
GAGGAGGGCG CCGAAGAACT GCTCGCCGAC CACGACATCG AACTGGAGTC GCTGCTGACG
GCGACGGAAT TGCTGGCGGA ACGCGACGCG GAGTAG
 
Protein sequence
MVADARCLGM TDDERRSELI AALRAADAVR FGEFELSHGG TSDYYVDKYL FETDPDALRL 
VSEAFADRLA DTDAKLAGVA LGAVPLVAVT ATELGRPYVI ARKQAKEYGT GNRIEGRLDE
GEEVVVLEDI ATTGQSAVDA VEALREAGAT VNRVLVVVDR EEGAEELLAD HDIELESLLT
ATELLAERDA E