Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0570 |
Symbol | |
ID | 7401705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 587849 |
End bp | 588274 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643707635 |
Product | UspA domain protein |
Protein accession | YP_002565242 |
Protein GI | 222479005 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.932953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGACG CGATCCTCTG TCCCACGGAC GGCAGCGCTG GAAGTGACGC CGCGGTCGAG CAGGCCTGCG ACCTCGCTGA ACTGACGGGC GCACGGATCC ACGCGCTGTT CGTCGTCGAC GAGGGGATCG CGGGCGCTGA CGAGTGGGAC CTTGTCGTCG ACCGGGAGGA AGAGCGGGGC GAGCGCGCGC TCGACGCGGT TGCCGAGGCG GCCGCGGACC GCGGTATCGA GGTCGAGCGC CACCTCCGAC GCGGTCGCCC GCACGAGGAG ATCCTCGACG CCGCGACCGA CTACGGGGTC GACCTGATCG TGATGGGGAC CCACGGCCGC ACCGGACTCG GCCGGTTCGT CACGGCGGGC TCGGTCGCTG AGCGGGTCGT GCGACACAGC AAGCTCCCGG TGTTGACGGC GCACATCGGT GACTGA
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Protein sequence | MYDAILCPTD GSAGSDAAVE QACDLAELTG ARIHALFVVD EGIAGADEWD LVVDREEERG ERALDAVAEA AADRGIEVER HLRRGRPHEE ILDAATDYGV DLIVMGTHGR TGLGRFVTAG SVAERVVRHS KLPVLTAHIG D
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