| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0531 |
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| Symbol | |
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| ID | 7400412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 553235 |
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| End bp | 554110 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643707596 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_002565203 |
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| Protein GI | 222478966 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.888127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTCA AGGTCGGTGC GCACGTCTCG ATCTCCAGTT CGAGAGCGTC CAACGATCCC
GAAACGCCGC CGTACGGAAA CATCGCGAAT GCGGTGTTCA GACAGAAGCA GTTCGGCGGC
AACTGCGGAC AGATATTCAC CCACTCCCCA CAGGTGTGGC AGGATCCGAA CATCGGCGAC
GAGGAGGCCG AGCGGTTCCG AGAGGGTACC GAACGCGACC TGGAGGGCCC GTGGGTGATC
CACACCTCCT ACCTCGTCAA CCTCTGTACA CCCAAGGAGG GGCTCCGCGA GAAGTCGCTC
GACTCGATGC AGAAGGAGGT CGACGCGGCC GACACGCTCG GGATTCCGTA CGTCAACGTC
CACCTCGGCG CGCACACGGG GGCGGGCGTC GAGGGCGGGC TCGACAACGC GGCGTCGGTG
ATCGACGACA TCGACGTGCC CGACGGCGTC ACGATCCTGA TCGAGAGCGA CGCGGGCGCT
GGCACGAAGC TCGGTGGCGA GTTCGAGCAC CTCGCGGGGA TCATCGATCG CACAGAGACC
GACATCGACG TCTGCGTCGA CACCGCCCAC GCGTTCGCGG CGGGCTACGA TCTTTCGACA
CCCGAAGCCG TCGACGAAAC GATCGCGGAG TTCGACGACG TGGTCGGGCT GGAACACCTC
AAGTACATCC ACCTCAACGA CTCGAAGCAC GCCTGCGGCA CCAACAAAGA CGAGCATGCC
CACATCGGCG AGGGACTCAT CGGCGAAGAC GGGATGGAGC GATTCCTCAA CCACCCGGAC
CTGATCGACG TGCCGCTCGC GCTGGAGACA CCCACCGAAG ACGGGAAGAG CTTCGCGTGG
AATATCGATC GCGTGCGCGA GCTTCGCGCG GAGTGA
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| Protein sequence | MSLKVGAHVS ISSSRASNDP ETPPYGNIAN AVFRQKQFGG NCGQIFTHSP QVWQDPNIGD
EEAERFREGT ERDLEGPWVI HTSYLVNLCT PKEGLREKSL DSMQKEVDAA DTLGIPYVNV
HLGAHTGAGV EGGLDNAASV IDDIDVPDGV TILIESDAGA GTKLGGEFEH LAGIIDRTET
DIDVCVDTAH AFAAGYDLST PEAVDETIAE FDDVVGLEHL KYIHLNDSKH ACGTNKDEHA
HIGEGLIGED GMERFLNHPD LIDVPLALET PTEDGKSFAW NIDRVRELRA E
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