Gene Hlac_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0505 
Symbol 
ID7400386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp525613 
End bp526443 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID643707570 
Productphosphate ABC transporter ATP-binding protein 
Protein accessionYP_002565177 
Protein GI222478940 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.497855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACA CAGAACCGAG CGAATCGCTC ATCACGACGG ACGTAGAGAC CGGATCGAAC 
GAGCAGACCG CGACGCCCGA TCGGACCGCG GTCGCCGCGC GCGACCTGAA CGTTTTCTAT
GGAGACGAAC AGGCGATCGA CGACGTGTCG ATGGAGATAC CCGAAAAACG GGTGACCGCG
CTGATCGGTC CCTCCGGCTG CGGCAAGTCG ACGTTCCTCC GGTGTATCAA CCGAATGAAC
GACATGATCG AGATCTGCCG CGTCGAGGGG GAGGTGGAGT TCGGCGGCAA GAACGTATAC
GACGCCGACG TGGACCCCGT CGCCCTCCGC CGGAAGATCG GGATGGTGTT CCAGAAGCCG
AACCCGTTCC CGAAGTCGAT CCGCGACAAC GTCGCGTACG GGCTGAAGAT CCAGGGGTAC
GACGGCGACA TCGACGAGCG CGTCGAGGAG TCGCTGAAAG GCGCTGCCCT CTGGGACGAG
GTGAAAGACC AACTCGACTC CTCGGGGCTC GAACTGTCCG GCGGGCAACA GCAGCGGCTC
TGTATCGCCC GGGCGATTGC GGCCGACCCG GAGGTCATCC TGATGGACGA GCCGACGTCA
GCGCTCGACC CCGTCGCGGC CTCGAAGATC GAGGACCTCA TCGACGATCT GGCGGAGGAG
TACACGGTGA TCATCGTCAC CCACAACATG CAGCAGGCGG CGCGCATCTC CGACCGGACC
GCCGTCTTCC TCACCGGCGG TCGGCTCGTC GAGTACGACG ACACGACGAA GATCTTCGAG
GACCCGGAAG AACAGCGCGT TGAAGACTAC ATCACGGGGA AGTTCGGATA G
 
Protein sequence
MSNTEPSESL ITTDVETGSN EQTATPDRTA VAARDLNVFY GDEQAIDDVS MEIPEKRVTA 
LIGPSGCGKS TFLRCINRMN DMIEICRVEG EVEFGGKNVY DADVDPVALR RKIGMVFQKP
NPFPKSIRDN VAYGLKIQGY DGDIDERVEE SLKGAALWDE VKDQLDSSGL ELSGGQQQRL
CIARAIAADP EVILMDEPTS ALDPVAASKI EDLIDDLAEE YTVIIVTHNM QQAARISDRT
AVFLTGGRLV EYDDTTKIFE DPEEQRVEDY ITGKFG