Gene Hlac_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0498 
Symbol 
ID7400379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp517043 
End bp517624 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content73% 
IMG OID643707563 
ProductBioY protein 
Protein accessionYP_002565170 
Protein GI222478933 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.583343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA GCACGGAATC GGTGGATCTC GTCGGCGACG AGGCCGCGAC GAACCTCGCC 
CGCGCGGCGC TGTTCGCCGC GCTCGTCGGC GCGTTCGCGT ACGTGACGTT CCCGAATCCC
GTCTCGCCCG TCTCGGTGAC GCTCCAGGTA CTCGGCGTGT TCCTCGCCGG GATCTACCTC
GGTCCAGTGT GGGGGGCGGC ATCAATCGTC CTCTACCTCG CGGCCGGCGC GCTGGGCGCC
CCGGTGTTCC AAGGCGGCTC CGCCGGTGTG GGCCAGCTCG TGGGCCAGTC GGCGGGCTAC
CTCTGGTCGT ACCCGCTCGC TGCTGCCGCG GTCGGCGCGG TCGTCCACCG CGGCGTGACG
CCCCGCGACC TCGACACGGT CGGGCTCCCG ACGCTTGTCG GCGCGATGGT CCTCGGTACC
GTCGTCATCT ACGCGCTCGG AGTGGCCGGG CTCGCCTTTG TGCTCTCGCT CGGGCCAATC
GAGGCGGTGA CCGTCGGCGC CGTCGCGTTC CTCCCCGCGG AGGCGCTGAA GATCGCCGCC
GCGGTCGGCA TCGTTCGCTC CGACGCGGTC GCGGCCGCGT GA
 
Protein sequence
MATSTESVDL VGDEAATNLA RAALFAALVG AFAYVTFPNP VSPVSVTLQV LGVFLAGIYL 
GPVWGAASIV LYLAAGALGA PVFQGGSAGV GQLVGQSAGY LWSYPLAAAA VGAVVHRGVT
PRDLDTVGLP TLVGAMVLGT VVIYALGVAG LAFVLSLGPI EAVTVGAVAF LPAEALKIAA
AVGIVRSDAV AAA