| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0451 |
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| Symbol | |
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| ID | 7401069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 468244 |
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| End bp | 468954 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643707515 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_002565123 |
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| Protein GI | 222478886 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00233078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.376483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTCG TCGTCAACGC GGCCCAGAGC GTCGACGGGA AACTCGCAAC GCGGCGCCGG
GAGCAGCTCC GGATCTCGGG ACCGGAGGAT TTCGACCGAG TCGACCGCGT CAGGGCGGCC
GCGGACGCGG TGTTAGTCGG GGTTGGAACC GTCCTCGCGG ACGACCCGCA CCTCACGCTC
GACGAGGAGG ACCGACGCGT CGAACGGCTC CGGAACGGCC GCCCGGGCAA CCCCGCCCGC
GTCGTCGTCG ACTCGACCGG ACGGACGCCG ACCGACGCCC GGATCCTCGA CGACGCGGCG
ACGACCTACC TGCTCGTCTC CGCGTCGGCG CCCCCCGAGC GACGCGAGGC GCTTGCGGCC
GCCGGTGCCG AGGTCGTCGT GGTCGAGGGC GGAAGCGGGA CCGAACGTGA GAGCGAGAGC
GACGGGGACC ACGTCGACCT CGTGGCGGGA ATCCACGCGC TGGCAGAGCG GGGCATCGAC
CGGCTGATGG TCGAGGGCGG CGGTGAAGTC ATCTACTCGT GTTTCGCGGC AGGACTCGTC
GACGAGCTTC ACGTGTATGT GGGGTCGATG GTGATCGGGG GGCGTGACGC GCCGACGCTC
GCCGACGGTG AGGGGTTCAC CGAAGCGTTC CCGCGGCTCG ATCTGGTCGA TACCGAGCGG
CTCGACGACG GAATCGTGCT CTCGTACGAG GTCGGAGACG GCACGCCGTA G
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| Protein sequence | MHVVVNAAQS VDGKLATRRR EQLRISGPED FDRVDRVRAA ADAVLVGVGT VLADDPHLTL
DEEDRRVERL RNGRPGNPAR VVVDSTGRTP TDARILDDAA TTYLLVSASA PPERREALAA
AGAEVVVVEG GSGTERESES DGDHVDLVAG IHALAERGID RLMVEGGGEV IYSCFAAGLV
DELHVYVGSM VIGGRDAPTL ADGEGFTEAF PRLDLVDTER LDDGIVLSYE VGDGTP
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