| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0377 |
|---|
| Symbol | |
|---|
| ID | 7399696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 397404 |
|---|
| End bp | 398189 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643707441 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002565050 |
|---|
| Protein GI | 222478813 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02315] phosphonate ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.308685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACA TCGAAGTAGA CGGTCTTACG AAACGATTCG GCGACACGGT CGCGCTCGAC
GACGTGTCCT TCGAGGTCCC CGCAGGCGAG TTCGTCATCG TGCTCGGCGT CTCCGGATCC
GGGAAGTCGA CGCTGCTCCG GACGCTGAGC GGGCTGCTCT CCCCGACGGA CGGTGAAATC
CTGATCGACG GCGAGCCCAT GTTCGAGCCC CGCCCGGAGG TCGCGATGAT CTTCCAACAG
CACAACATCA TCGGCGACAT GACGGCGTAC TCGAACTCGC TTTCCGGGGG CGTGCACCGC
TCCGGGTTCC TCTCCAGCGT CCTCCAGCTA CAGGATCCTG AGGAGAAACA CCGCGCTCTC
GACGCGCTTG ACACGGTCGG CCTCCTAGAC GAAGCCGAAC AGAAGGCGCG AAGTATGAGC
GGCGGTCAAC AGCAGCGGGT GGGGATCTCC CGTGCGCTCG TCCAGCAGCC GAACGTCTTG
CTCGCCGACG AGCCGGTCGC GAGCCTCGAC CCCGGCAGCG CACAGAGCGT GATGAACTAC
CTCCGGACCG CCTCCAATGA CCGCGATCTG ACGACCTTCT GTAGCCTCCA CCAGGTGAAT
ATCGCTCGGA AGTTCGGGCA CCGCTTCATC GGTCTGCGCG ACGGCAAAAA GGTGTTCGAC
GGGTACCGAG ACGAGCTGAC GATCGACGTC ATCGACGACC TCTACGGCGA CATCGACACT
GAGGGGATGT TCGTCCGAGA TGACGGCGAC AGCGACGAGG CGACCGACGA GGTCGCGACG
ACGTGA
|
|---|
| Protein sequence | MTYIEVDGLT KRFGDTVALD DVSFEVPAGE FVIVLGVSGS GKSTLLRTLS GLLSPTDGEI
LIDGEPMFEP RPEVAMIFQQ HNIIGDMTAY SNSLSGGVHR SGFLSSVLQL QDPEEKHRAL
DALDTVGLLD EAEQKARSMS GGQQQRVGIS RALVQQPNVL LADEPVASLD PGSAQSVMNY
LRTASNDRDL TTFCSLHQVN IARKFGHRFI GLRDGKKVFD GYRDELTIDV IDDLYGDIDT
EGMFVRDDGD SDEATDEVAT T
|
|---|
| |