Gene Hlac_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0370 
Symbol 
ID7399763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp392749 
End bp393342 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content69% 
IMG OID643707434 
Productglutamine amidotransferase subunit PdxT 
Protein accessionYP_002565043 
Protein GI222478806 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAG GCGTCATCGC CGTCCAGGGG GACGTGGCCG AACACGCCGC CGCCGTCGAG 
AACGCCGCGG CCGCCCACGG CGAGCCCGCG GAAGTGGTCG AGGTCCGGGA CGCGGGAATC
GTCCCTGACT GCGACGTGCT CCTCATGCCG GGCGGGGAGT CGACGACCAT CTCGCGGCTG
ATCCGCCGAG AGGGGATCGA CGAGGAGATC CGCGAGCACG TCGCGAGCGG AAAGCCCGTA
CTCGCCACCT GCGCGGGTCT CATCGTCTGT TCGCGGGACG CGAAGGACGA CCGGGTCGAC
GCGCTCGGGC TCGTAAACGT CTCCGTCGAC CGCAACGCGT TCGGCAGACA GAAAGACTCC
TTCGAAGCGA AGATCCCCAT GACCGGGCTC GACGAGCCGT TCCACGCCGT GTTCATCCGT
GCGCCGCTCA TCGACGACGT GGGGGAAGGC GTCGAAGTAC TCGCGACCGT CGACGGCCGC
CCGGTCGCGG TTCGGGACGG GCCGGTGGTC GCCACCGCGT TCCACCCGGA GCTCACCGAC
GACTCGCGGA TCCACGACCT CGCCTTTTTC CCCGAGCAGG AGGTGGTCGC GTGA
 
Protein sequence
MQAGVIAVQG DVAEHAAAVE NAAAAHGEPA EVVEVRDAGI VPDCDVLLMP GGESTTISRL 
IRREGIDEEI REHVASGKPV LATCAGLIVC SRDAKDDRVD ALGLVNVSVD RNAFGRQKDS
FEAKIPMTGL DEPFHAVFIR APLIDDVGEG VEVLATVDGR PVAVRDGPVV ATAFHPELTD
DSRIHDLAFF PEQEVVA