Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0293 |
Symbol | |
ID | 7401219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 316723 |
End bp | 318507 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643707356 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_002564968 |
Protein GI | 222478731 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0367979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.30338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCCG AGGAGATCGG CGAGCTGGCG AAGCGGCGCG GGTTCTTCTT CGGCTCGAAC GGTGCGTACG GCGGCACCGC CGGATTCTAC ACCTTCGGTC CGCAGGGCGC GGCGCTGAAG AAGAACGTCG AGGACGCGTG GCGCGACCGG TTCACCATCC GAGAGGGGAA CCGCGAGATC GAGGCCCCGA CGATCATGCC GGAAGCCGTC TTCGAGGCGT CCGGCCACCT AGAGGGGTTC GACGACATGC TCGTCGAGTG TCCCGAGTGC GGCGAGTCCC ACCGCGCCGA CCACCTCGTC GAGGCGGTCA CAGAGATCGA GGACGCCGAG GCGCTGCCCG GGTCGGAAGT CGAGGAGCTC ATCGCCGACA ACGACATCGC CTGCCCGTCC TGTGGCACCC CGCTTGCGGG CGTGACGGTC GAGGACTTCA ACCTCATGTT CGCGACCGAC ATCGGTCCCG GCGACGGCCA GCCCGGCTAC CTGCGGCCGG AGACGGCACA AGGTATCTTC GTGGAGTTCC CGCGGCTGAA GGAGTACGCC CGCGGGAACC TCCCGTTCGG GATCACCCAG ATCGGTCCGG CCTACCGCAA CGAGATCTCG CCGCGCGGCG GGCTCCTCCG GCTGCGTGAG TTCACGCAGG CGGAACTGGA GCAGTTCATC GACCCCGAAG AGGACGAGCC GCCGCTGGAC CGCGTGCGCG ACGTGTCGGT CCGGCTGTAC CCCGCGACCG AACAGCAGGC CGAGGACGGC GAGTACGTCG AGACCACGAT CGGCGAGGCG GTCGACGAGG AGATCATCGG CTCCCCGTGG GTCGGCTACT ACCTCGGCGT CGCGAAGGAG TGGTACGACC GGATCGGCGT CGACCTCGAC CGCTTCCGGT TCCGCCAGCA CCTCGCGGGC GAGCGCGCCC ACTACGCGTC CGACTGCTGG GATGCGGAGA GCGAAGTCGA CGGCGACTGG ATCGAGATCG CGGGCTTCTC GTACCGCGCC GACTACGACC TCTCGAAACA CGACGAGTAC GGCGACGACG CGTTCACCGT GTTCAAGCGC TACGACGAGC CGAAGACGGT CGAGCGCGCA ACCGTCGACC CCGACATGTC CGTGCTCGGC CCCGAATTCG GCGGGGACGC CGCCGCGGTC GCCGAGGCCC TCGAAACCCT CGCCGAGCGC GATCCCGACG CGTTCGACAG CGAGACGGTG TCGGTCGAGG TGAACGGCGA CGACCAGACC GTCGACACCG ACGTGGCGAA CTTCTCGGTC GAGACGGTGA CCGAGAACGG CGAGCACCTC ACGCCGCACG TCGTCGAACC GTCCTTCGGC GTGGGCCGGA CAGTCCAGAC CCTGCTGGCG CACGCCTACA GCGAGGACGA GGTCGACGGC GAGGAGCGAA CGTACCTCTC CTTAGAGCCC GAGGTCGCGC CGCAGGACGC CGCCGTCTTC CCGCTCGTGA CCAACGACGA CCGGCTCACC GAGCTGGCCG ACCGCGTCGC AGCCGACCTC CGCGAGGCGG GGGTGGCGGT CGCGTACGAC GACTCCGGCT CGATCGGGCG GCGCTATCGC CGCCAAGACG AGATCGGGAC TCCGTTCTGC GTCACGATCG ACCGCGACGG GATCGAGGGC GACGGCCCAG AGACGGTGAC CGTCCGCGAG CGCGACTCCG CGGTGCAGGT CCGGGTCCCG GCCGAAGAGC TGGCCACGGA GCTGACCGCG CTCCGCACCG GCGGCGAGTT CGACGCGCTG GTGGACCGTT ACGAGACAGT CGCGACCGAC GTCGAGACCA ACTGA
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Protein sequence | MASEEIGELA KRRGFFFGSN GAYGGTAGFY TFGPQGAALK KNVEDAWRDR FTIREGNREI EAPTIMPEAV FEASGHLEGF DDMLVECPEC GESHRADHLV EAVTEIEDAE ALPGSEVEEL IADNDIACPS CGTPLAGVTV EDFNLMFATD IGPGDGQPGY LRPETAQGIF VEFPRLKEYA RGNLPFGITQ IGPAYRNEIS PRGGLLRLRE FTQAELEQFI DPEEDEPPLD RVRDVSVRLY PATEQQAEDG EYVETTIGEA VDEEIIGSPW VGYYLGVAKE WYDRIGVDLD RFRFRQHLAG ERAHYASDCW DAESEVDGDW IEIAGFSYRA DYDLSKHDEY GDDAFTVFKR YDEPKTVERA TVDPDMSVLG PEFGGDAAAV AEALETLAER DPDAFDSETV SVEVNGDDQT VDTDVANFSV ETVTENGEHL TPHVVEPSFG VGRTVQTLLA HAYSEDEVDG EERTYLSLEP EVAPQDAAVF PLVTNDDRLT ELADRVAADL REAGVAVAYD DSGSIGRRYR RQDEIGTPFC VTIDRDGIEG DGPETVTVRE RDSAVQVRVP AEELATELTA LRTGGEFDAL VDRYETVATD VETN
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