| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0259 |
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| Symbol | |
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| ID | 7401185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 279524 |
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| End bp | 282118 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643707322 |
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| Product | DNA topoisomerase type IA central domain protein |
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| Protein accession | YP_002564934 |
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| Protein GI | 222478697 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCG GCCCCGAACT GATAATCACG GAGAAAGACA ACGCGGCGCG TCGCATCGCC
GACATCCTGA GCGGCGAGTC CGCAACGGCG GAGCGGGAAA ACGACGTGAA CGTGTACAAG
TGGGGCGGCA AGCGCTGTAT CGGCCTCTCG GGTCACGTCG TCGGCGTCGA CTTCCCCGCC
GAGTACAACG ATTGGCGCGA CGTGGAACCC GTCGAACTGA TCGACGCACC GATCACCAAA
GAGCCCACCC AAGAGGGAAT CGTCGCGGCC CTCCGGAAAC TGGCGCGCAA CGCCTCCCGA
GTCGTCATCG CGACCGACTA CGACCGCGAG GGCGAGCTGA TCGGCAAGGA GGCGTACGAG
CTGGTGCGCG AGGTGAACGA GGACGCTCCC ATCGACCGCG TCCGGTTCTC CTCGATCACC
GACAACGAGG TAAACGAGGC GTTCGCGAAC CCCGACGAGC TCGACTTCGA TCTGGCCGCC
GCCGGGGAGG CCCGGCAGGT GATCGACCTG ACGTGGGGCG CGGCGCTCAC CCGCTTCCTC
TCGCTGTCCG CCCGCCAGCT CGGCGAGGAC TTCATCTCCG TGGGCCGGGT GCAGGGACCG
ACGCTCAAGC TGATCGTCGA CCGCGAGCGA GAGATCAAAG CGTTCGATCC CGAAGCGTAC
TGGGAGCTGT ACGGGAACCT GACCAAGTCC GGCGGCGACC CCTTCGAGGC GCGCTACTTC
TACCTGAACG ACGAGGGCAA CGAGGCCGAG CGCGTCTGGA ACGGCGACGT CGCGGAGGTC
CTCACGGAGG CGTTCGACGC GGCCGACGAG GCGGTCGTCG ACGACGTGCG CCGGCGGACC
CGCACCGACG ACCCGCCGAC CCCGTTCAAC ACCACGGCGT TCATCCGCGC CGCAGGCTCG
CTCGGACACT CCGCGCAACG CGCGATGTCG CTCGCTGAGG ACTTGTACAC GGCTGGCTAC
GTCACCTACC CCCGGACTGA TAACACGGTG TACCCAGAGG ATCTCGACCC CCGCGAGCTG
ATCGAGGAGC TGTCGGTCGC CTCGACGTTC GGGAAAGACG CGAAGAGCCT CCTCGAACAG
GAGGAGATCG AGCCCACCGA GGGCGACGAG GAGACGACCG ATCACCCGCC GATCCACCCG
ACCGGGGAGC TTCCCTCCGC TTCCGACCTC TCGGAGGACG AGTGGGAGGT GTACGAGCTG
ATCGTCCGCC GCTTCCTCGC GACCTGCGCC GAGCCCGCGA CGTGGGAGCG GCTCCGCGTC
GTCGCGCTCG CGAACGACGA GGCGACCGCG ATCGCCGAGC GCGCGGACGG GCTCGCCGCT
CTCCGCAATC CCGAGGAGGC GAGCGGCCCC GGCGACCTCG TCGCCGACGG CGGGCTCCGG
CTGAAGGCGA ACGGGAAGCG CCTGTTGGAG GCCGGCTACC ACGACGTGTA CCCGTACCGC
TCCAGCGACG AGCGGATCGT CCCCGACGTC GAGGTCGGCG AGACGCTCGC GCTCACCGAC
CGGCGGACGG ACGCGAAGGA GACTCAGCCG CCCCGTCGAT ACGGGCAGTC CCGGCTCATC
GAGGAGATGG AGAAGCGCGG CGTCGGCACG AAGGCGACCC GACACCGTAC CCTCGAAAAG
CTGTACGACC GCAACTACAT CGAGAGCGAC CCGCCGCGGC CGACCCGGCT CGCGGAGGCG
GTCGTCGAGG CCGCAGAAGA GTTCGCGGAA CACGTCGTGA GCGAGGAGAT GACCGCCCAG
CTCGAACGCG ACATGCAGGC GATCGCGGCC GGCGAGAAGG GGTACGACGA GGTGACCGAG
GCATCCCGCG AGCTGCTCAA CCGCGTGTTC GACGACCTCA CCGAGTCGCG CGAGGCGGTC
GGCGACCACC TCCAGAAGTC GCTGAAGGCG GATAAGACGC TCGGCCCCTG CCCGGAATGC
GGCTCCGACC TCCTCGTCCG AAAGTCTCGA CAGGGGTCGT ACTTCGTCGG CTGCGACGGC
TACCCGGACT GTGAGTACAC CCTTCCGCTC CCCTCCAGCG GGAAGCCGCT GCTCTTAGAC
GAGACCTGCG AGGAGCACGA ACTCCGGCAC GTGAAGATGC TCGCAGGCCG GAAGACGTTC
GTCCACGGCT GCCCGCAGTG CAAGGCCGAC GAGGCCGACG AGCAGGAAGA CGAGGTTATC
GGGGCGTGTC CGGAGTGTGG CGAGGAGCAC GGCGGAGAGT TAGCTATCAA GCGGCTCCGC
TCTGGCTCCC GACTCGTCGG CTGCACGCGC TACCCCGACT GCGACTACTC GCTGCCGCTC
CCCCGGCGCG GTGAGATCGA GGTCACCGAC GAAATCTGCG AGGAGCACGG CCTTCCGCAC
CTCCGGGTCC ACTCCGGCGA CGAGCCGTGG GAGCTCGGCT GTCCCATCTG CAACTACCGG
GAGTTCACCG CCCGGCAGGA GGGCTCGGAG CTCCAGACCG TCGAAGGGAT CGGCGAGAAG
ACCGCCGAGA AGCTGAAAGA CGCCGGCGTC GACGGCGTCG ACGACCTCAA GTCGATCGAT
CCGGACGAGT TGGCGGCCGA CGTCGACGGC GTGGGCGCGG ACACGGTCCG CGACTGGCAG
GCGAAGGCGG ACTAA
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| Protein sequence | MSRGPELIIT EKDNAARRIA DILSGESATA ERENDVNVYK WGGKRCIGLS GHVVGVDFPA
EYNDWRDVEP VELIDAPITK EPTQEGIVAA LRKLARNASR VVIATDYDRE GELIGKEAYE
LVREVNEDAP IDRVRFSSIT DNEVNEAFAN PDELDFDLAA AGEARQVIDL TWGAALTRFL
SLSARQLGED FISVGRVQGP TLKLIVDRER EIKAFDPEAY WELYGNLTKS GGDPFEARYF
YLNDEGNEAE RVWNGDVAEV LTEAFDAADE AVVDDVRRRT RTDDPPTPFN TTAFIRAAGS
LGHSAQRAMS LAEDLYTAGY VTYPRTDNTV YPEDLDPREL IEELSVASTF GKDAKSLLEQ
EEIEPTEGDE ETTDHPPIHP TGELPSASDL SEDEWEVYEL IVRRFLATCA EPATWERLRV
VALANDEATA IAERADGLAA LRNPEEASGP GDLVADGGLR LKANGKRLLE AGYHDVYPYR
SSDERIVPDV EVGETLALTD RRTDAKETQP PRRYGQSRLI EEMEKRGVGT KATRHRTLEK
LYDRNYIESD PPRPTRLAEA VVEAAEEFAE HVVSEEMTAQ LERDMQAIAA GEKGYDEVTE
ASRELLNRVF DDLTESREAV GDHLQKSLKA DKTLGPCPEC GSDLLVRKSR QGSYFVGCDG
YPDCEYTLPL PSSGKPLLLD ETCEEHELRH VKMLAGRKTF VHGCPQCKAD EADEQEDEVI
GACPECGEEH GGELAIKRLR SGSRLVGCTR YPDCDYSLPL PRRGEIEVTD EICEEHGLPH
LRVHSGDEPW ELGCPICNYR EFTARQEGSE LQTVEGIGEK TAEKLKDAGV DGVDDLKSID
PDELAADVDG VGADTVRDWQ AKAD
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