Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0224 |
Symbol | |
ID | 7402153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 242228 |
End bp | 243877 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643707287 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002564899 |
Protein GI | 222478662 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0391267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0314439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAG AGCTCACGCT CCGCCCGTTC TTCTGGCGGG CGACCCGACT GTTCCCGGAG ACGGAGGTCG TCTCCCGCAC CCACGACGGG GTCGACCGCT ACACGTACGC CGACTTCGGC GACCGCGTCC GGCGGCTCGC GGCCGCGCTC GCGGAGTTGG GCGTCGAGCC CGGCGACCGC GTCGGAACGC TCGGGTGGAA CACCCACCGG CACTTCGAGG CGTACTACGC GGTCCCCCTC TCGGGCGCCC AGCTCCACAC GGTGAACCTC CTCTTACAGG ACGACCACGT CGAGTACATC ATCAACGACG CCGCGGACGA CGTGCTGATC GTCGACCGCG ACGCCGTCGC GACGCTCGAC CGACTGTGGG ACCGGATCGA CGGCGTCCGC GAGGTCGTCG TCATGGGTGA TTCGGTGCCG GAGACGGAGT CCGACCTGCC GCTCTCGGCG TTCGAGGAGC TGATCGCGGA CGCCGACCCG GTAGAATCGT GGCCGCCGCT CTCGGAGGAC GACCCGGCCG GGATGTGTTA CACCTCCGGC ACCACGGGGA AGCCGAAGGG CGTCGAGTAC ACGCACAAGA TGATCTACGC CCACGCGATG ATGGTGATGA CGCCCGCCGC GCTCGACATC GCCGAGGACG ACGTGGTGAT GCCCGTCGTT CCCATGTTTC ACGTAAACTC GTGGGAGTTC CCCTACGCCG TGACGATGGC CGGCGCGAAA CAGGTGTATC CGGGACCGTC CCCGGACCCC GCGGACCTCG TCGAGCTGAT CGAGTCCGAG GGCGTGACGC TCACGGCGGG CGTGCCCACC GTCTGGATCG ACGTGCTCGA CCACCTCGAC GAGCACGGCG GCGATCTCTC CTCGCTGGAG CGGATCGTCG TCGGCGGGAG CGCGGCGCCC CGAGAGGTGA TGCGCCGGTA CGAGGACGAA CACGACGTGA CGATCGAACA CGCGTGGGGG ATGACCGAGA CGATGAGTAT CGGCTCGGTC TCCCGACCGA CCTCGGCGAT GGCCGGTGCC GATCGCGAGG CGAAACTCGA CAAACGGGCG AAACAGGGGC TGCTCTCGCC CGGCCTTGAA ATGCGGGTCG TCGACGACGA CGACAAGCCG GTCGCCTGGG ACGGCGAGGC GTTCGGCGAA CTGCTCGTCC GGGGACCCTC GGTCGTCGAA GAGTACTACG ACCGCCCGGA GGCCGACGCG ACGGACTTCG TCGCGGCCGA CGACGGCGGG GCGCGGTGGC TCCGCACCGG CGACATCGCC ACCGTCGACG AAGACGGGTA CATGGAGGTC GTCGACCGGG TCAAGGACGT GATCAAGTCG GGCGGCGAGT GGATCTCCAG CATCGAGTTG GAGAACGCCT TGATGGCCCA CGAGGACGTC GCCGAGGCGG TCGTGATCGC GGCGTCCCAC GAGCGCTGGC AGGAGCGCCC GCTGGCGTTC GTCGTGCCGA AGGCGGGCCG CGAGCTCGAC GTCGAGGGGA TCCGAACGTT CCTCGCCGAC GAGTTCCCGC GGTGGTGGCT CCCGGACGAC GTGCGGTTCC GCGAGGAGAT TCCGAAGACC GCGACCGGGA AGTTCGACAA GAAGACGCTC CGGGAGACCG TCGACGATCC CGCTCTGCCG TACGCGCCGG GAGAGGAGGG TGGAGAATGA
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Protein sequence | MPEELTLRPF FWRATRLFPE TEVVSRTHDG VDRYTYADFG DRVRRLAAAL AELGVEPGDR VGTLGWNTHR HFEAYYAVPL SGAQLHTVNL LLQDDHVEYI INDAADDVLI VDRDAVATLD RLWDRIDGVR EVVVMGDSVP ETESDLPLSA FEELIADADP VESWPPLSED DPAGMCYTSG TTGKPKGVEY THKMIYAHAM MVMTPAALDI AEDDVVMPVV PMFHVNSWEF PYAVTMAGAK QVYPGPSPDP ADLVELIESE GVTLTAGVPT VWIDVLDHLD EHGGDLSSLE RIVVGGSAAP REVMRRYEDE HDVTIEHAWG MTETMSIGSV SRPTSAMAGA DREAKLDKRA KQGLLSPGLE MRVVDDDDKP VAWDGEAFGE LLVRGPSVVE EYYDRPEADA TDFVAADDGG ARWLRTGDIA TVDEDGYMEV VDRVKDVIKS GGEWISSIEL ENALMAHEDV AEAVVIAASH ERWQERPLAF VVPKAGRELD VEGIRTFLAD EFPRWWLPDD VRFREEIPKT ATGKFDKKTL RETVDDPALP YAPGEEGGE
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