Gene Hlac_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0213 
Symbol 
ID7402142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp228904 
End bp229815 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content65% 
IMG OID643707276 
ProductHpcH/HpaI aldolase 
Protein accessionYP_002564888 
Protein GI222478651 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.209563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG TTACCCTTCG TCGGACGCAG CTTGCAACGC CAGCGAGCGA CGAGAAGATG 
ATGCACTCGG CAGCCGACAG CGACGCCGAT GAGGTGTTCC TCGATCTCGA AGACTCCGTG
GCACCGAACG CGAAGCCGGA CGCGCGCGCG CCCCTGATCA AGGCGGCCCG CGAGGAGGAC
TGGAGCGACA AGGTCCTCAG CTTCCGGATG AACGGGATCG ACACGAAGTG GTGGTACGAC
GACCTGATCA CGGTCGTCGG CGAGGCGGGC GAGTTCATCG ACGACATCAT CGTTCCGAAG
GTGAAGTCCG CCAGCGACGT GCACACGGTC GAGAACCTGC TCGCGCAGGT CGAAGAGAAC
AACGGGCTGG AGGTCGGGGG CATCGGCCTC GAACCCCAGA TCGAAGACGG CGAGGGGATC
CACAACGTTC ACGATATCGC CCACGCCTCT GATCGACTCT CGTCGATCAT CTTCGGACCG
GGCGACTACT CCGCGGCGAT GGGCACGCCC GGACTCGACA TCGGCCAGTT CCCGGAGTAC
CCGGGCCACT ACTGGCACCA CGCCCTCTCC GAGTGTAACT CCGCGGCGAA GTCGGCCGGG
GTGCCGTGTC TCGACGGCCC GTACGCCGAC ATCGAGGATT CCGACGGCTT CCGCGAGTCC
GCCGAAAACG CCAACATGAT CGGCTGTGAC GGCAAGTGGG CGATCCATCC GTCGCAGATC
GAGATCGGCA ACGAAGTGTT CGCACCGGAC CCGGAGACCG CCGAGCGCGC CAAGCGCATC
GTCGACGCCT ACGCCGAGGC GATGGAGGAG GGCAAGGGCG CCGTGAGCGT CGACGGGCAG
ATGGTCGACG AGGCGACCAA CAAGATGGCC CAAGACATCG TTGAGACGGC CGAGGCGGCC
GGGATCCTCT AA
 
Protein sequence
MTDVTLRRTQ LATPASDEKM MHSAADSDAD EVFLDLEDSV APNAKPDARA PLIKAAREED 
WSDKVLSFRM NGIDTKWWYD DLITVVGEAG EFIDDIIVPK VKSASDVHTV ENLLAQVEEN
NGLEVGGIGL EPQIEDGEGI HNVHDIAHAS DRLSSIIFGP GDYSAAMGTP GLDIGQFPEY
PGHYWHHALS ECNSAAKSAG VPCLDGPYAD IEDSDGFRES AENANMIGCD GKWAIHPSQI
EIGNEVFAPD PETAERAKRI VDAYAEAMEE GKGAVSVDGQ MVDEATNKMA QDIVETAEAA
GIL