| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0164 |
|---|
| Symbol | |
|---|
| ID | 7402093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 175429 |
|---|
| End bp | 176217 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643707227 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002564839 |
|---|
| Protein GI | 222478602 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.858664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAC TCACGGCGCC CGGCGACGAG GCGACCGCCG ACGACTCCGT CGATATCGAT
CCGACCGAGC AGACTGACGA TTCGACCGCA CGGGCCGACG ACACGGAGTA CACCTTCGAC
GACGTGAGCG TCGTGATGGG GACGTACAAC GAGGAAGAAG CGATCGGAAC CGTCCTCTCC
GACATCGACG AGGTCACCGG CGGGCGCGCC GAGATCGTCT GCGTCGACGG CTCCTCGGAC
CGGACGCCGG AGATCGCCCG CGAGCACGGC GCGCGCGTCG TCGAACAGGA GCCGCAGGGG
TACGGTGTCG CCGTCCGCGA GGCGATTTTA ACGCCCGACC GCCCGGTCGT CGTCACGACC
GACTGCGACG ACACCTACCC GATGGAGCAG CTGCCGGAGT TCCTCGAAGC GATCAACGAC
GGCGCCGACG TCGTCAGCGG CGACCGCCTC TATCACGGCG CAAAGGCGAT GCCCGCGTTC
AACCGCCTCG GCAACCACGC GTTCGCGGCC ATCGCGTCCG TCCTGATGGG CGAGCGCGTC
CACGACACCA CCACCGGGAT GCGCGCCTAC CGCCGCGAGG TCGTCGAGGA CATCGGATGG
ACCGAGAACA CCGGCCTCTC CGCTGAACTG CTCATCCGTC CGCTGATGCG CGGCCACGAC
GTGCGCGAGC GACCGATCGA CTACGCCGAG CGACTGGGCG AGACGAAGCT CGACCCGATC
GAGGGCGGCG TCGCCATCGC GAAGTCGATC GTGACGGTCT GTCTGGAAGA GCAGCTGCGA
CGGCTCTGA
|
|---|
| Protein sequence | MSSLTAPGDE ATADDSVDID PTEQTDDSTA RADDTEYTFD DVSVVMGTYN EEEAIGTVLS
DIDEVTGGRA EIVCVDGSSD RTPEIAREHG ARVVEQEPQG YGVAVREAIL TPDRPVVVTT
DCDDTYPMEQ LPEFLEAIND GADVVSGDRL YHGAKAMPAF NRLGNHAFAA IASVLMGERV
HDTTTGMRAY RREVVEDIGW TENTGLSAEL LIRPLMRGHD VRERPIDYAE RLGETKLDPI
EGGVAIAKSI VTVCLEEQLR RL
|
|---|
| |