| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0139 |
|---|
| Symbol | |
|---|
| ID | 7401660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 147209 |
|---|
| End bp | 148336 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643707203 |
|---|
| Product | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit |
|---|
| Protein accession | YP_002564815 |
|---|
| Protein GI | 222478578 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTATGAAG AGGTGGGTTC GACCGTGAGC GTGTTCGACA GAGCGTACGA CGATCCGGTC
CGCGTTCTCG ACGAGGGCGG CGAGGTCGTC GGCGACGTGC CGGACCTCGA CGACGAGGCG
CTCGTCGAGA TGTACCGGGA CATGCGGCTG GCGCGGCACT TCGACGGTCG CGCCGTGAGC
CTCCAGCGGC AGGGGCGGAT GGGGACGTAT CCGCCGCTGT CCGGACAGGA GGGCGCGCAG
ATCGGCTCCG CGACCGCGCT CGACGAGGAC GACTGGATGG TCCCCTCGTA CCGCGAGCAC
GGCGCGGCGC TCGTTCGTGG ACTCCCGCTG AAACAGACCC TACTCTACTG GATGGGCCAC
GAGGCGGGCA ACGCGACGCC CGAGGGCGTG AACGTGTTCC CGGTCGCGGT CCCCATCGCC
TCGCAGGTCC CGCACGCCAC CGGTGCGGCG TGGGCGTCGA AGCTCCGCGG CGAGAACGAC
GCGTTCCTCT GTTACTTCGG GGACGGCGCG ACCAGCGAGG GCGACTTCCA CGAGGGGGTC
AACTTCGCGG GCGTGTTCGA TACGCCGACC GTCTTCTTCT GTAACAACAA CCAATGGGCC
ATCTCCGTGC CCCGCGAGCG ACAGACGCGG AGTGCGACGC TGGCCCAGAA GGCGGAGGCG
TACGGGATCG ACGGGGTACA GGTCGACGGG ATGGACCCGT TGGCGGTGTA CAGCGTCACG
AAGGCAGCCG TCGAGAAGGC GCGTGACCCC GAGACCGACC GACCTCGCCC GACGCTGATC
GAGGCGATCC AGTATCGGTT CGGCGCGCAC ACGACCGCCG ACGATCCGAC GGTCTACCGC
GACGACGACG AGGTCGAGAG CTGGAAACGG AAGGACCCGA TCCCGCGACT CGAACGCTAC
CTCCGGTCCG AGGGCGTGCT CGACGACGAG CGCGTCGCGG AGATCGAGAC CGCCGTCGAG
ACACGGGTGG CAGAGGCCAT CGAGGCGGCC GAGTCGGAGG TGCGGCCGAA GCCACAAGAG
ATGTTCGAGC ACGCGTACGC GGAGCTCCCA CCCGAGCTAG AGCGGCAGTA CGAGGAGTTC
GCGGCGTTCC GCGAGGCACA CGGCGACGAA GCATTCTTGG AGGAGTGA
|
|---|
| Protein sequence | MYEEVGSTVS VFDRAYDDPV RVLDEGGEVV GDVPDLDDEA LVEMYRDMRL ARHFDGRAVS
LQRQGRMGTY PPLSGQEGAQ IGSATALDED DWMVPSYREH GAALVRGLPL KQTLLYWMGH
EAGNATPEGV NVFPVAVPIA SQVPHATGAA WASKLRGEND AFLCYFGDGA TSEGDFHEGV
NFAGVFDTPT VFFCNNNQWA ISVPRERQTR SATLAQKAEA YGIDGVQVDG MDPLAVYSVT
KAAVEKARDP ETDRPRPTLI EAIQYRFGAH TTADDPTVYR DDDEVESWKR KDPIPRLERY
LRSEGVLDDE RVAEIETAVE TRVAEAIEAA ESEVRPKPQE MFEHAYAELP PELERQYEEF
AAFREAHGDE AFLEE
|
|---|
| |