| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0107 |
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| Symbol | |
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| ID | 7401625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 112378 |
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| End bp | 113943 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643707168 |
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| Product | DNA-directed RNA polymerase subunit beta'' |
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| Protein accession | YP_002564783 |
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| Protein GI | 222478546 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.397905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.532786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGC AAGACCGACG CGTGGTGTCA CGTGAGTATT TCTCGGACGA ACGGCTCGCC
GAACACCACT TCCGATCGTT CAACAACTTC CTGGACCGCG GCATGCAGGA GGTCGTCGAC
GAGAAGGAGA CGATCGAGAC CGATATCGGC GACAAAGAGG GCCAAGAGCC CGTCTACGTC
GAACTCGGCG ATGTGCGGAT GGTCACTCCG CGCGTCCGCG AGGCCGACGG CTCCGAAGAG
CTGCTGTACC CCCAAGAGGC CCGGCTTCGG AACATCACCT ACTCGGCGCC CGTGTTCATG
GAGATGTCCA TCGTGCGCGG CGGCGAAGAC GAGCCCGAGC AGGTCGTCGA CACGACCGAG
ACGAAGGTCG GCCGGATGCC GATCATGGTC GGCTCGAACA AGTGCAACAT GGCCGGCTTC
TCCGACGACG AGCTCATCGA CATCGGTGAA GATCCCGTCG ACCCCGGCGG CTACTTCATC
GTCAACGGCT CCGAGCGCGT GCTGATGACC TCGGAGGACC TCGCGCCGAA CAAGATCCTC
GCCGAGTACG ACTCGAAGTA CGGCGACGAG ATCCAGGTCG CAAAGACGTT CTCCCAACGC
CGCGGGTACC GTGCGCTGGT GCTTTGCGAG CGCAACCGTG AAGGGCTGCT CGAAGTGTCG
TTCCCGTCCG TCTCGGGCTC GATTGACTTC GTGACCCTCG TTCGCGCCCT CGGGCTCGAA
TCCGACGAGG AGATCGTTCA CCGCGTCTCG GACGACCCCG AGATTGTGAA GTTCATGCTG
GAGAACTTGG AGGAGGCCGA GGTGCAGACG ACCGAGGGGG CCATCGAAAC CCTCGGCGAG
CGCGTCGCCT CCGGACAGGG GAAGAACTAC CAGCTCAAGC GGGCCAACTA CGTCATCGAC
CGCTACCTCC TCCCGCACCT CCACGAGGAG GGCGTCGACG AGGAGGACGT GCGGATCAAC
AAGGCGTACT ACCTCTGCCG GATGGCCGAG GCGTGCTTCG AACTCGCCTT GGAGCGCCGC
GAGGCCGACG ACAAGGACCA CTACGCGAAC AAGCGCCTGA AGGTCTCCGG CGACCTGATG
CGCGACCTGT TCCGGACCGC GCTGAACAAG CTGGCACGCG ACGTGAAGTA CCAGCTTGAG
CGCGCGAACA TGCGGAACCG CGATCTCACG GTCAACACGG TTGTCCGCTC CGACGTACTG
ACCGAGCGGC TCGAACACCC GATCGCGACG GGGAACTGGG TGGGTGGTCG CTCCGGCGTC
TCCCAGCTCG TTGACCGGAC GGACTACATG GGTGTGCTCT CGCACCTCCG GCGCCTGCGC
TCGCCGCTGT CGCGGTCGCA GCCGCACTTC AAGGCGCGAG ACCTCCACGC GACCCAGTGG
GGTCGCATCT GTCCCTCCGA GACTCCGGAG GGGCCGAACT GTGGACTCGT GAAGAACTTC
GCGCAGGCGA TGGAGCTCTC ACAAACCGTA GACGACGAAC AGGGGCTGAA ACGAGAACTG
GCGTCGATGG GTGTCGAGGG GATTCCCGGC ATCGAGGGCG TCGACCGACA GACGGCGGAC
GACTAA
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| Protein sequence | MNRQDRRVVS REYFSDERLA EHHFRSFNNF LDRGMQEVVD EKETIETDIG DKEGQEPVYV
ELGDVRMVTP RVREADGSEE LLYPQEARLR NITYSAPVFM EMSIVRGGED EPEQVVDTTE
TKVGRMPIMV GSNKCNMAGF SDDELIDIGE DPVDPGGYFI VNGSERVLMT SEDLAPNKIL
AEYDSKYGDE IQVAKTFSQR RGYRALVLCE RNREGLLEVS FPSVSGSIDF VTLVRALGLE
SDEEIVHRVS DDPEIVKFML ENLEEAEVQT TEGAIETLGE RVASGQGKNY QLKRANYVID
RYLLPHLHEE GVDEEDVRIN KAYYLCRMAE ACFELALERR EADDKDHYAN KRLKVSGDLM
RDLFRTALNK LARDVKYQLE RANMRNRDLT VNTVVRSDVL TERLEHPIAT GNWVGGRSGV
SQLVDRTDYM GVLSHLRRLR SPLSRSQPHF KARDLHATQW GRICPSETPE GPNCGLVKNF
AQAMELSQTV DDEQGLKREL ASMGVEGIPG IEGVDRQTAD D
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