Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0100 |
Symbol | |
ID | 7401618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 103848 |
End bp | 104501 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643707161 |
Product | 30S ribosomal protein S7P |
Protein accession | YP_002564776 |
Protein GI | 222478539 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0049] Ribosomal protein S7 |
TIGRFAM ID | [TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.252795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGGG AGGAGACCGA GGCGCCGTCC GACGAGGACG TCGCCGCCGA CGAGCCCGAG CCTGACGCAC CCGCGTCCAG CGAGGCCGCC AACGAGAACG CCCAGCTGTT CGACGTGTGG GACGTCACCG AGATCGCCTA CGAGGATCCC TCGACGAAGC GCTACATGAC CGTGACGCCC ATCGCGCACA CGATGGGTCG TCACGCGTCC AAGCAGTTCA AGAAGTCCGA GATCTCGCTG GTCGAGCGGA TGATCAACCG TCTGATGCAG ACCGACGAGA ACACGGGCAA GAAACAGCAG GCGACGCGGA TCGTCCGTGA CGCCTTCGAC ATCATCCACG AGCGGACCGA GGAGAACCCG GTCCAGATTC TCGTGACGGC CGTCGAGAAC GCCGCGCCCC GCGAGGAGAC CGTCCGCCTG AAGTACGGTG GTATCTCCGT CCCGAAGGCG GTCGACGTCG CACCCCAGCG CCGCGTCGAT CAGGCGCTGC TGTTCATCTC CGACGGCGTT GCTAACGCGA CGTACAAGTC GACGACCTCC GCCGCCGAAG CGCTCGCCAA CGAGCTCATC ACGGCCGCTG ATTACGACCC CGAGCGCTCC TACTCCATCT CGCAGAAGGA GGAGCGCGAA CGCGTCGCCG CCGCGGCCCG CTAA
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Protein sequence | MSGEETEAPS DEDVAADEPE PDAPASSEAA NENAQLFDVW DVTEIAYEDP STKRYMTVTP IAHTMGRHAS KQFKKSEISL VERMINRLMQ TDENTGKKQQ ATRIVRDAFD IIHERTEENP VQILVTAVEN AAPREETVRL KYGGISVPKA VDVAPQRRVD QALLFISDGV ANATYKSTTS AAEALANELI TAADYDPERS YSISQKEERE RVAAAAR
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