| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0085 |
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| Symbol | |
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| ID | 7401603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 89713 |
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| End bp | 90477 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643707146 |
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| Product | rhodopsin |
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| Protein accession | YP_002564761 |
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| Protein GI | 222478524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5524] Bacteriorhodopsin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTCG ACACCTCCGT CTGGGCGTGG CTCGGCGTGC TCGCTATGGG CGCTGGCACG
ATCCTCCCGC TGTGGGCGTG GTTCTCCCGG TCTTCGGAGA CCGGGGAGTC ACACGCCGTC
TACTATCTGA CGCTCGCCGG GGTCACCGGC GTCGCGGCGC TCGCGTACTT CGCGATGGCG
CTCGATGTCG GCACGGTGTC GGTGTCGGCC GGTGACCTCG AAGTCGTTCG GTACGTCGAT
TGGCTCGTGA CGACACCGCT TTTGATCCTT TACCTCGGGC TGCTCGCCCG GCCGTCCCGA
CGCGTGCTCG TCGGGCTGAT CGGGGTCGAC GTGGTGATCA TCGCCGGCGG TATCGTCGCC
GCTGCCACCA CCGGAACGGT TTCGTGGGTC GCCTTCGGCG TCGCCGGAGT CGCGTACCTC
GGACTTGTCT ACGGGCTCCT CGTCTCGCTC CCGCGGTCGG CCTCGGCGGA GGGGGACCGG
ATCCGCGCCG TCTTCGGTAC GCTCCGGAAC ATCACGGTGG TGTTGTGGAC GCTGTACCCG
GTCGTGTGGC TGCTCGCGCC CACCGGGTTC GGCCTGCTGA CGCCGACGAC GGAGATGCTC
GTGTTCGTCT ACCTCGATAT CGTCTCGAAG GTCGGCTTCG TCGTCGTCGC GGTTATGGGC
GCGGACGCGC TCAACCGCCT CGATGACGAC CGCGAATTTG TCGCCACCGA CCCCGCTGTT
GCCCCCGACG CCGAGGAGCA CACGACCGTC CTCGGCGACG ACTGA
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| Protein sequence | MLVDTSVWAW LGVLAMGAGT ILPLWAWFSR SSETGESHAV YYLTLAGVTG VAALAYFAMA
LDVGTVSVSA GDLEVVRYVD WLVTTPLLIL YLGLLARPSR RVLVGLIGVD VVIIAGGIVA
AATTGTVSWV AFGVAGVAYL GLVYGLLVSL PRSASAEGDR IRAVFGTLRN ITVVLWTLYP
VVWLLAPTGF GLLTPTTEML VFVYLDIVSK VGFVVVAVMG ADALNRLDDD REFVATDPAV
APDAEEHTTV LGDD
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