Gene Hlac_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0071 
Symbol 
ID7401426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp76604 
End bp77593 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content65% 
IMG OID643707132 
ProductBile acid:sodium symporter 
Protein accessionYP_002564747 
Protein GI222478510 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCG TCGAGAAGTA CCAGTCGGCG CTCGTTCTTG CCGCCATCGC TGTCGGTCTC 
GCGGTTGGGC AGATCGACGG CGTCGCGTCC GTCGCGGACC GACTCATTCT CCCGTTCCTG
ATGGTCATGC TGTTCGCCGC ATTCGTCGGT ATCCCGCTCT CCCACCTCCG GGAGGCGTTC
GGGAACCGTC GCGTGGTGGG ATCGAGCCTG CTGGTTAACT TCGTCTGGAG TCCGCTGCTG
GCGGTCGGAC TCGGGGCAGT CTTCCTCCGC GACCAGCCCG CGCTCTGGGT CGGACTCATC
ATGCTTCTGG TGACGCCGTG TACGGACTGG TATCTCGTCT TCACCGATAT CGCCGACGGC
GACGTGCCGC TGGCGACATC CGTGCTGCCG TACAACCTCG TCCTCCAACT GGTGTTGCTA
CCGGTGTATC TCTACGCGTT CGCGGGGACG CTCGTCGACC TCCCGCTCGC GCTCTTAGTC
GAGAGCGTCT TGCTCGTGCT GGTCGTCCCG CTGATTTTCG GCGGCATCGC CCGGTGGGGC
CTCACCCAGA CGAAGGGAGA GACGTGGTTC AGAGAGCGAT TCCTGCCGCG ACTGAGCCCG
ATCCAGATCG TCTTCCTCGC GCTGGCCATC GGAGCGATGT TCGCGTCGCA AGGCGAGGTG
GTCGTCGAGA ACCCCCGCCT GTTGGCGCTG CTTGCGGTTC CCGTCGTGCT GTTCTACGCG
ATCAACCTCG CGGTCGGGTT CGCCGCCGGC CGCCTGCTTT CCTTCTCGTA CGGCGAGATG
GTCTGTTTCA ACAACACCAT CCTCTCGCGG AACTCCCCCA CCGCGCTCGC GATCGCCGTC
GTCGCGTTCC CCAACGAGCC GCTGATCCCG CTGGCGCTCG TGATCGGGCC ACTGCTCGAA
CTCCCGCTTT TAGGCGTTAT CGCGCAGGTC CATCTCGCGG TCAGGGAGCG CTGGACGACC
CGCTTCGACG TCTCGTCGAA CGACCGATAG
 
Protein sequence
MDLVEKYQSA LVLAAIAVGL AVGQIDGVAS VADRLILPFL MVMLFAAFVG IPLSHLREAF 
GNRRVVGSSL LVNFVWSPLL AVGLGAVFLR DQPALWVGLI MLLVTPCTDW YLVFTDIADG
DVPLATSVLP YNLVLQLVLL PVYLYAFAGT LVDLPLALLV ESVLLVLVVP LIFGGIARWG
LTQTKGETWF RERFLPRLSP IQIVFLALAI GAMFASQGEV VVENPRLLAL LAVPVVLFYA
INLAVGFAAG RLLSFSYGEM VCFNNTILSR NSPTALAIAV VAFPNEPLIP LALVIGPLLE
LPLLGVIAQV HLAVRERWTT RFDVSSNDR