Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0049 |
Symbol | |
ID | 7401402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 49902 |
End bp | 50417 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643707108 |
Product | hypothetical protein |
Protein accession | YP_002564725 |
Protein GI | 222478488 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.172931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00049209 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTCCGGT CACTCAGGGA GAACGGTCCA GGGCTGCTCG TACCGGCGGC GTGGACCGTC GTCGCCGCGA CAGTGCTCGG TGTCATCTCG ACACGCGCGC TGTTCGTCGC GCACGTCGTC ATGAGCGTCC TGCTCGTCGC GTTCGTCGCC GCCTCGTGGC GCGACATGTC CGACGGCGTG CTCCGAGCGT GGAAGCTCGT GATCCTCGCA GGTACGCCCG TCACGCTCGC TGGCGTCGCG GGGTTCCTTG CATTCGGGGA CACCTTCGGT GTCCCTCCGG ACGCCCTGCT CGCGGTCTCG CTTTTCGGCT GGGCGCTCCT CCCGGCGGCT GGGTTCGCCT ACACCCGGAG TCGTGTCGAG GAGGGCGCGC GTATCTACGA TGTCGGCGCC GCTTGTTGTG TCGCCGGAAC GGTCGGCATC GCGTTGGCTC CCTCGGCGAC GTGGACCGCA GCCGCGCTCG CCGTCGTCGG CGCCGGACAG ACGGCCGGCA TCCTCGACGC CACGCTGCGG TACTGA
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Protein sequence | MFRSLRENGP GLLVPAAWTV VAATVLGVIS TRALFVAHVV MSVLLVAFVA ASWRDMSDGV LRAWKLVILA GTPVTLAGVA GFLAFGDTFG VPPDALLAVS LFGWALLPAA GFAYTRSRVE EGARIYDVGA ACCVAGTVGI ALAPSATWTA AALAVVGAGQ TAGILDATLR Y
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