Gene Hlac_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0028 
Symbol 
ID7401381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp29317 
End bp30066 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID643707087 
Productphospholipase/Carboxylesterase 
Protein accessionYP_002564704 
Protein GI222478467 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0609492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG GACCCCTGCA TACGGGCGAC GACCCGCACG CCGACGAGGA GCTGGTGACC 
GCCGGCACCG ACATCGAGGC GGCGGACGCC GCCGTCGTCC TCGTCCACGG TCGTGGCGCG
ACCGCGCGGA GCATCGTCGA GTTCGGGACG GAGGTCGCAG GCGACTACGA TATCGCGCTC
TCGCCGGCGG CTTCGCCGCC GGCTGTCAGA GAGACCTCCG GTCTCTCACT ACTCGCGCCG
CAGGCGGCGG CGAACACGTG GTACCCGAAC TCCTTCCTCG CTCCGGTCGC GGACAACGAA
CCCGGCCGGA GTTCCGGTCT GCGTGCCATC GGCCGCGCAG TCGAGACCGC GACGGACGCA
GGGATTCCGG CCGAGTGCGT CCTCGTTGGT GGCTTCTCGC AGGGCGCCTG TCTCGCGAGC
GAGTTCGTTG CGCGAAATCC GTCGCAATAC GGTGGGCTCG CGGCACTGAG CGGCGGGCTG
ATCGGCGAGT CGATCGATCT CGACGATTAC GTCTCCCACG CGGCGGCCGC GGTCGACGGG
GACCCCGCCG ACGCGCTCGC GGGAACGCCG GCGTTTCTCG GGTGCAGTGA TGTCGACCCG
CACATCCCCG AAGAGCGGGT CCACGAGACG GCCGACGTGC TTGCGGCGCT CGGTGGCAAT
GTCGAGACCC GGATCTACGA GGGGATGGGT CACGGGATCA ACGAGGAGGA GACGGCGTCC
GTCTCCGAGA TGGTCGCGAA CCTGACGTAG
 
Protein sequence
MSRGPLHTGD DPHADEELVT AGTDIEAADA AVVLVHGRGA TARSIVEFGT EVAGDYDIAL 
SPAASPPAVR ETSGLSLLAP QAAANTWYPN SFLAPVADNE PGRSSGLRAI GRAVETATDA
GIPAECVLVG GFSQGACLAS EFVARNPSQY GGLAALSGGL IGESIDLDDY VSHAAAAVDG
DPADALAGTP AFLGCSDVDP HIPEERVHET ADVLAALGGN VETRIYEGMG HGINEEETAS
VSEMVANLT