Gene Hlac_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0024 
Symbol 
ID7401377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp27137 
End bp27994 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content64% 
IMG OID643707083 
Producthypothetical protein 
Protein accessionYP_002564700 
Protein GI222478463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0384083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC GCGCTGTGGC CGTGTACGCT GCGCTCTTCG TTCTCGTCGC GGGCGTGGCC 
GGTGTGCTCA CTGTGACGGC CGATAGCCCG GAGATCGGCT TCGAAAACCC TGACTACGAG
GTCTCGGACG GTGAGACGAT CGAGGTCGAG GGCCAGGAGT ACGTCGTCGA GATCACCGAA
GTTGAGGAGA GCGGCGGTGG TGGTCACGGT GGCGGTGGTG GCGGGACCTC GCTCGTGGCG
ACGATCGAGC GCAACATGAC CGTGGAACAG TCCGAGGCCT GGGCGAACGG GTCGACGGTT
CAGTTCAACG AGCGGGAGTG GCGCGTGGAG ATCACGGGTG AGGATCCGAG CGAATTCACG
CTCGTTGAGG TACCCGACCG ACAGGCGATC CTCGAAGCTG ATCCGCAGGC CGACAACGAG
ACCGTCCAGC GCGACGACGG CGAGTACGTC GTCGTCACCG AGGACGGCGA GTCGAGTCTC
ATCCCGGTCG GGGAGTACTT CCCGGCCCCC GAGGAGCGCT CGTACGCTAC GGGTGGCACC
CTTGAGTACA GTAGTCAGAC CGCGACCGTT GACAACGTCA CGGCGGACCA AGCGGTGCTC
GTCTGGGAGG CCACGGAGAC GGAGTCGATC GAGGTTCAGG ACGAGGGGAT CGTCACGCTC
GTCGAGACGG ACCTCGTCGC GCACTTCGCC GACTCCTCGA CCCTCCACCT GTCGAGCGAT
ATCGAGGGGT ACGATGCACA GGTCGCGGAG ATCGAGCAGT TTGAACAGTA CAACTCCGGA
CTGACGCGCG TGGTGATCCT CGCGCTGTTC TCGATCGTTC TCCTGCTCTC GGCGGCGTTT
ATTCCCTCGC GGTACTGA
 
Protein sequence
MQRRAVAVYA ALFVLVAGVA GVLTVTADSP EIGFENPDYE VSDGETIEVE GQEYVVEITE 
VEESGGGGHG GGGGGTSLVA TIERNMTVEQ SEAWANGSTV QFNEREWRVE ITGEDPSEFT
LVEVPDRQAI LEADPQADNE TVQRDDGEYV VVTEDGESSL IPVGEYFPAP EERSYATGGT
LEYSSQTATV DNVTADQAVL VWEATETESI EVQDEGIVTL VETDLVAHFA DSSTLHLSSD
IEGYDAQVAE IEQFEQYNSG LTRVVILALF SIVLLLSAAF IPSRY