Gene Hlac_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0023 
Symbol 
ID7401376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp26033 
End bp26836 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content64% 
IMG OID643707082 
Productregulatory protein Crp 
Protein accessionYP_002564699 
Protein GI222478462 
COG category[K] Transcription 
COG ID[COG1497] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.780112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0232711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATT CCGATAGAGC GACACCACCA GAGGTCCTCG ACAGCAAGCG CGACGCAACG 
CGATATCAGG TTTTGGTAGA GATCGCCGCC CGGCAACCCG CAGTGAGCCA AACAGAGATT
GCCGAAGCGA TCGGCGTAAC GTCGCAGGCC GTCAGTGATT ACGTGAGGGA CCTCGTGGAG
CACGAATACG TCGAGAAGGA AGGTCGAGGA CGGTATACGG TAACAAAGGA AGGCGTCGAC
TGGCTGATCT CCAGAACCGA CAGTTTGGAG GCATACCTCA ACCGCGTCAG CTCCGACGTG
CTTGGCAGCG TCGACGTCGA CGCCGCGATC GCGATGGACG ACATCGCCGA GGGAAGCGAC
GTGGGCCTGC TCATGCGTAA CGGCGTCCTC CATGCGAACC CCGCAGGCGG GACAGCAACG
GCGGTCACCG TCACCGCTGC CGCAGCGGGC GAAGCCGTCG GTGTCGCCGA TTTCGAGGGC
GTAGTTGATT ACGAGACCGG ATACGTCACA GTGCTCCCCG TTCCAGCCGT CACAGACGCG
GCATCGGTCG CCCCCGACGT GCTCACAGCG ACCCGCCCGT CCGAGAGCTT GCTCGCCGTC
GCCGGTACCG AAGCGTACGC GCTCGCCGCG CGGGCGGACG CACACCCGGA TATCCGGTTC
GGAACGGTCG ACGCCGTCGC CGAAGCCGCA GTGCGCGGCA TGAACGTACT ACTAATCGTT
ACGGCCGACC AGCTACCGAA ACACACCGCG CGGCTCCGCG ACGAGAACAT CCCGCACGAA
GTGCTCGACG CGGGCGACTT CTGA
 
Protein sequence
MTDSDRATPP EVLDSKRDAT RYQVLVEIAA RQPAVSQTEI AEAIGVTSQA VSDYVRDLVE 
HEYVEKEGRG RYTVTKEGVD WLISRTDSLE AYLNRVSSDV LGSVDVDAAI AMDDIAEGSD
VGLLMRNGVL HANPAGGTAT AVTVTAAAAG EAVGVADFEG VVDYETGYVT VLPVPAVTDA
ASVAPDVLTA TRPSESLLAV AGTEAYALAA RADAHPDIRF GTVDAVAEAA VRGMNVLLIV
TADQLPKHTA RLRDENIPHE VLDAGDF