| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0018 |
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| Symbol | valS |
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| ID | 7401366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 15448 |
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| End bp | 18126 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643707072 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_002564694 |
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| Protein GI | 222478457 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.910453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.161561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTG GTGAGTACGA CCCAGACACC GTCGAGCCGC GGTGGCAGCG GCGATGGGTC
GACGAGGAGA CGTACGCCTA CCCCGACGAC GACCCGGTCG ATCCGAACAC GGTCTTCTCC
ATCGACACGC CCCCGCCGAC GGTATCGGGG AGCCTCCACA TGGGCCACCT GTACGGCTTT
ACCCTCCAGG ACTTCGTCGC CCGATTCGAG CGCATGAACG GTGGAGAGAC GTTCTTCCCG
TTCGGCTACG ACGACAACGG TATCGCCTCC GAGCGGCTCA CCGAGGACGA ACTCGATATC
CGCCACCAGG ACTTCGAACG CCGGGAGTTC CAGGCGAAAT GTCGGGAGGT CTGTGCCGAG
TACGAGGCGC AGTTCACCGA GAACGTCCAG TCGCTCGGCG TCTCAGTCGA CTGGGACCAC
ACTTACCAGA CGATCGAGCC GCGCGTCCAG CGCATCTCCC AGCTGTCGTT CCTCGACCTG
TACGATCAGG GTCGCGAGTA CCGCGAGAAG GCGCCCGCGA TCTGGTGTCC CGAGTGCGAG
ACCGCCATCT CGCAGGTCGA GACCGAGGAC GACGAGCAGG CCAGCCACTT CCACGATATC
GCCTTCCCCG TGGTCGGAGG CGACGCAACC GATGACGGCG CCGAGGAGTT CGTCATCTCG
ACGACGCGCC CCGAACTTCT CCCCGCGTGC GTTGCCGTCT TCGTCCACCC CGACGACGAC
GAGAACCAGA ACCTCGTCGG TGAGTCCGCC GAGGTCCCGC TGTTCGGCCA CGAGGTGCCG
ATCATCGCCG ACGAGCGCGT CGACATGGAG ACGGGTTCCG GCATCGTGAT GTGCTGTACG
TTCGGCGACC AGAACGATAT CGAGTGGTAC CAGGTCCACG ACCTGAACCT CCGGGTCGCT
ATCGACGAGT CCGGACATAT GACCGACGTC GCCGAGGGGT ACGAAGGGAT GCACGCAGAC
GAGGCCCGCG AGGCTATCGT CGAAGACCTC GACGGGGCGG GCGCGCTGCT GGACCGCCGC
GATATCACCC ACACCGTCAA CGTTCACGAG CGCTGCGGGA CGAGCGTCGA GTTCCTCGTC
ACCGAGCAGT GGTACGTCGA GATGCTCGAC AAGACCGACG AGTACCTCGA GATCGGCCGG
GAGATGGAGT GGTCTCCGGA GAAGATGTTC ACCCGGTACG AGCACTGGGT CGAGGGGCTC
CAGTGGGACT GGCTCATCTC TCGTCAGCGC TCCTCGGGCA TCCCGTTCCC GGTGTGGTAC
TGCGAGGACT GCGGGGAGAT CGTCGTCGCC GAGAAGGCCG ACCTGCCCGT CGACCCCCTC
TCGGACGACC CGCCGGTCGA CGCCTGTCCC GAGTGCGGCC ACGACGAGTT CGAACCTGAA
GACGACGTGC TCGACACGTG GGCCACCTCC AGCCTGACCC CGCTCATCAA CGCCGGCTGG
GACTGGGACG AGGACGCCGG GGAGTTCACC ATGGAACACC CCGAACTGTA CCAATTCGAC
CTCCGACCAC AGGGCCACGA TATCATCAGC TTCTGGCTGT TCCACACGCT GGTGAAGTGC
TACGAGCACA CCGGTGAGGT TCCGTTCGAG GAGACGATGA TCAACGGCCA CGTCCTCGAC
GAGAATCGGG AGAAGATGTC GAAGTCCGTC GGTAACGTCG TCGAGCCGGA GGCGGTGCTG
GCGGAGTTCC CGGTCGACGC CACGCGCTAC TGGGCCGCCG GGACCGCCGT CGGCGACGAC
TTCCCGTTCA AAGAGAAGGA CCTCCGCGCG GGCGAGAAGC TGATCCGCAA GCTGTGGAAC
GCCTCTAAGC TCGTCGAGTC GCTGGCGCCG GAGCCGTACC CGGATACGCC GGCCGACGAA
GACCTCCGAG AGCTCGACCG CTGGCTGCTC GCCGAGCTCG ACGACCGAAT CGAGCGACTC
ACTGGGCTCT TCGAGGATCG CGCGTTCTCG AAGGCCCGCG ACGAACTCCG GAGCTTCTTC
TGGAACACGT TCTGTGACGA CTACCTCGAG ATCGTCAAAC AGCGCGAGGA CGACGCCGCG
GCGTACACGC TCCGGACGGC ACACCGGCGG TTCCTGAAGT TGTTTGCCCC GCTGCTCGCG
CACGTTACCG AAGAGCTCTG GCACGACATG TACGCCGATG GAGCGAGCGA CCCCGACGCG
GTCGACGCCG CCGTCGCCGA CGGCGCGCGC GACTCGATCC ACCTCGCCGA CTGGCCCGAG
CCGCTCGGTC TGGAGGCAGA CCACGAGGCT GGTGCGGCCG CCACGGCAGT CGTCGGTGCC
CTCCGAAAGT ACAAGAGCAA GAACCAGCTC CCGCTGAACG CCGAGCTCGA TGCCGTCGAG
GTGTACGCCG ATGTCCGCGG GTTTGAGGAG GACATCACGG GCGTGATGCA TGTTGCGGAC
CTTACCGTCC ATCCCGATGA GGACGCCCCG GTCGAGACGG TGATCACCGG GATCGACCTC
GACTACGCCA CCGTTGGGCC GAAGTACGGT GATCAGGTCG GGGACATCGA GGCGGCGCTC
GCGAAAGAGG AGTACGAGAT CGACGGCGAG GAGCTCCACG TTACGGGTGT TACGCTTGTC
GAGGAGGAGT TCGCGATCGA GGAGGAGCGA CAGTACCAGG GCGACGGCGA GCTGTTAGAG
GCGGACGACG TGGTCGTTAT CGTCCGTAAC GAGGCGTAG
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| Protein sequence | MPSGEYDPDT VEPRWQRRWV DEETYAYPDD DPVDPNTVFS IDTPPPTVSG SLHMGHLYGF
TLQDFVARFE RMNGGETFFP FGYDDNGIAS ERLTEDELDI RHQDFERREF QAKCREVCAE
YEAQFTENVQ SLGVSVDWDH TYQTIEPRVQ RISQLSFLDL YDQGREYREK APAIWCPECE
TAISQVETED DEQASHFHDI AFPVVGGDAT DDGAEEFVIS TTRPELLPAC VAVFVHPDDD
ENQNLVGESA EVPLFGHEVP IIADERVDME TGSGIVMCCT FGDQNDIEWY QVHDLNLRVA
IDESGHMTDV AEGYEGMHAD EAREAIVEDL DGAGALLDRR DITHTVNVHE RCGTSVEFLV
TEQWYVEMLD KTDEYLEIGR EMEWSPEKMF TRYEHWVEGL QWDWLISRQR SSGIPFPVWY
CEDCGEIVVA EKADLPVDPL SDDPPVDACP ECGHDEFEPE DDVLDTWATS SLTPLINAGW
DWDEDAGEFT MEHPELYQFD LRPQGHDIIS FWLFHTLVKC YEHTGEVPFE ETMINGHVLD
ENREKMSKSV GNVVEPEAVL AEFPVDATRY WAAGTAVGDD FPFKEKDLRA GEKLIRKLWN
ASKLVESLAP EPYPDTPADE DLRELDRWLL AELDDRIERL TGLFEDRAFS KARDELRSFF
WNTFCDDYLE IVKQREDDAA AYTLRTAHRR FLKLFAPLLA HVTEELWHDM YADGASDPDA
VDAAVADGAR DSIHLADWPE PLGLEADHEA GAAATAVVGA LRKYKSKNQL PLNAELDAVE
VYADVRGFEE DITGVMHVAD LTVHPDEDAP VETVITGIDL DYATVGPKYG DQVGDIEAAL
AKEEYEIDGE ELHVTGVTLV EEEFAIEEER QYQGDGELLE ADDVVVIVRN EA
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