Gene Hlac_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3217 
Symbol 
ID7399343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand- 
Start bp459486 
End bp460490 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content55% 
IMG OID643707014 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_002564636 
Protein GI222476115 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGG ACGCACGGGT ACTACAGCCC GAATTTGTCC CCAACGACGT GAAGCACAGA 
TCGGCGGAGG TGAGCCACCT TTCCGATACC TTGCGCCCGA TAGTCGACGG CGAGCGGGCG 
ACCAACTCCC TCCTATATGG GCCATCGGGA GCCGGGAAGA CCTGTATCGC CCAGTTCACG 
ATCGAACAAC TCCGAGAGAA CGTTGTCGAC CTCAATTACC AATACGTGAA CTGTTGGGAA 
GACCACACCC GATTCAAGAC GCTCTACAGG CTCTTAGACG GGATCGAGAG TACGTTCGAT 
ATCCATCGGC AGTCGACGCC AAAGGACGAG CTCTTGGAGC GCCTACGGGC ATACGATGGT 
CCACCCTACG TTGTCATCCT CGACGAAGTC GACCAGCTAC AGGACAAGAG CCTGTTGTAC 
GATCTCTATC GGATGCGCGA CCTCACGATG ATCCTCATTG CCAACCGGGA GGAAGACGTG 
TTCAGCACGC TTGATGGACG GCTCAACAGT CGACTGGAGT CCTGTGCCCG CATCCGATTC 
GGACAGTACG ACATTCGAGA GTTAGTGACG ATTCTTGAAG ATCGCGCTCG ATGGGGACTT 
GAACCGGGTG CTGTCGATGA GCAACACCTG GAAACAATCG CGGATTATGC AGCTGGTGAT 
GCACGGATAG CTATCGGGAT CTTCCGAAAC GCCGCACGAG TAGCACGGCA GAACGGCGAC 
GACGGAATAA CTGTCGACGT AATCGAGCGC GTAGTTCCGG AAACGAAATC GGAAATCAGA 
CAGAAGACGA CCGACAAACT CACCGAGCAT CAGCAGGTCC TCTACGAGAC GATAAAGAAG 
GAAGGCGAGA TCGGGGCGGG CGACCTCTAC GATGCCTACT GTGAGGCAGT CGACGATCCG 
AAGACCCGTC GAACAATGCG AAACCATCTC TCGAAACTGG AACAGTACAA TCTCGTTTTT 
GCCAATGGGA AGACAAAGGC TCGGACATAC CAGCCTTACT CTTGA
 
Protein sequence
MITDARVLQP EFVPNDVKHR SAEVSHLSDT LRPIVDGERA TNSLLYGPSG AGKTCIAQFT 
IEQLRENVVD LNYQYVNCWE DHTRFKTLYR LLDGIESTFD IHRQSTPKDE LLERLRAYDG 
PPYVVILDEV DQLQDKSLLY DLYRMRDLTM ILIANREEDV FSTLDGRLNS RLESCARIRF 
GQYDIRELVT ILEDRARWGL EPGAVDEQHL ETIADYAAGD ARIAIGIFRN AARVARQNGD 
DGITVDVIER VVPETKSEIR QKTTDKLTEH QQVLYETIKK EGEIGAGDLY DAYCEAVDDP 
KTRRTMRNHL SKLEQYNLVF ANGKTKARTY QPYS