Gene Hlac_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2997 
Symbol 
ID7398974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp257759 
End bp259258 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content54% 
IMG OID643706807 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_002564429 
Protein GI222475908 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTAA ATCTTTTTAA CGCCTCGGCG TACAGCAAGC GTATGGCCGG TAGTGATCAG 
GATGGAGCGG ACCAATCTAC CCTCGACGAA GGAACTCGTT CTAGAGCTGA CGCAGAACAC
ATAGAAGCCG GTGGGGAGAA TGCTACCGGG AACGTGATAC CGGAGCAAAC CGAGGAGACT
GTAGAGGACA GTACACAGCG GTCAATTCGG GATATGCTCG ACGATGAGGG AGAAGCATCC
GTTTTTGTCA ATCGAGATCT CGTCGAGCCG GACACGATCA TCGATGAAGA GCGAATCGTC
GGACGTGATG ACCAACTCGA GTCCGTCGTT TCGTTTCTGA AACCGACTCT CCAAGGAAAC
CGGCCTCCGA ATATGCTGCT GTACGGGCCA GCTGGGACGG GAAAATCACT CATTATCGGG
GCAGTCACAC AGCAGATCAT CGAGCTCTGT CAGTCCAAAG GCGAACACTT CGGCGTTGTC
GACATCAACT GCCAGCCGAT CAATACCCTC GATCAAGCTG TCTTCGAACT CGTCCAAACC
GTCGCGAAGG ACGTCGGTGC AGAGGTCGGC GTCCCAGAGA CGGGAGTGTC GACGAAGCGC
AAGTATCGGC GCTTGTATGA GCTGATCAAC GAACACTACG ACTCAGTCAT TTTCATCCTT
GACGAGATCG ATCTCCTGGT CGGCCGACGA GCGAACGACG AACCCGCCTA CTCGAAACTG
CTCTATCAGC TATCGCGAGC AAGTAACACG AACGAAATCG AAGGACAAGT ATCAGTCGCA
GCTCTGACGA ATGACCCCAA ATTCATGGAG GATATCGACG GTCGTGCCGA GAGTTCATTC
AATCCACGGG ACGTCTATTT CCCCGATTAT GATGCTAATC AGCTCCGCCA AATACTCGAG
AACCGTCGTG ACGCCTTCCG GTCCGATGCG TTAACTGACG ACGTGCTACC GCTCGTTTCA
GCATTCGCGG CCCAAAGCCA TGGAGACGCA CGAAAGGCAA TCGACTTATT CCGCGGTGCC
GGTGACCTCG CGGATGAACG GGGTGACGAG AAAGTTCGCG AAGAACACGT CCGCGAATCT
CAGGAAGAAA TCGACAAGGA CCGCTCACTG AAGTTAATCG AGGGTCTGAC CACCCAGAAG
AAGATATCCC TCTACGCGAC CGCCTCCGTC GCCCATTTCT CCAATTGGTC CGGGAGTTCC
GTCCCGAGTC CGGTCGGCTT CAAAGTCTAC CAATGGATTA CCGATGAGAT CGATGCTGAC
CAGATGACGC GGGAGACCTA TGTCAAGTAC GTCAAAGAGC TCTCCACGTA TGGTCTCATC
TCGACCTCAC GGAAGAGTCG AGGCCGTGGT GGCGGAATGT ACATGGAGTT CACGTTCACG
GGGGATCCCG AAGCCATGAT GAATCGGATC GTCGACGACA CTCGTTTGGA AGCTATCTCC
GATCAGGAGG ACCTCCTCCA GTCCGTCGTT AACGCCCAGT TGAAGGAGTT CCACAATTAG
 
Protein sequence
MEVNLFNASA YSKRMAGSDQ DGADQSTLDE GTRSRADAEH IEAGGENATG NVIPEQTEET 
VEDSTQRSIR DMLDDEGEAS VFVNRDLVEP DTIIDEERIV GRDDQLESVV SFLKPTLQGN
RPPNMLLYGP AGTGKSLIIG AVTQQIIELC QSKGEHFGVV DINCQPINTL DQAVFELVQT
VAKDVGAEVG VPETGVSTKR KYRRLYELIN EHYDSVIFIL DEIDLLVGRR ANDEPAYSKL
LYQLSRASNT NEIEGQVSVA ALTNDPKFME DIDGRAESSF NPRDVYFPDY DANQLRQILE
NRRDAFRSDA LTDDVLPLVS AFAAQSHGDA RKAIDLFRGA GDLADERGDE KVREEHVRES
QEEIDKDRSL KLIEGLTTQK KISLYATASV AHFSNWSGSS VPSPVGFKVY QWITDEIDAD
QMTRETYVKY VKELSTYGLI STSRKSRGRG GGMYMEFTFT GDPEAMMNRI VDDTRLEAIS
DQEDLLQSVV NAQLKEFHN