Gene Hlac_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2874 
Symbol 
ID7398873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp135886 
End bp137094 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content62% 
IMG OID643706693 
ProductNucleotidyl transferase 
Protein accessionYP_002564319 
Protein GI222475798 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGGAG TCGTGCTCGC GGCCGGCCGC GGGACCCGCA TGCGGCCCTT GACAGATCGG 
CGTCCAAAAC CGCTTCTTCC TGTGGGTGAT CGTTCGCTGC TTGAACAGGT ATTCGACACT
GCAGTCGATG TCGTCGACGA GTTCGTCGTC GTCACCGGCT ATCGCGGTGA CGCGATTCGT
GAGTCGATCG GTGAATCGTA CCGGGATCGT CCGGTGACCT ACGTCGAGCA AGAAGAAGCG
AAGGGGACGG CTCACGCCAT CGCACAAGCC GCGCCTGTCG TGGACGACGA CTTCCTCGTG
CTCAACGGGG ACGTGGTTGT CGACGCGTCG CTCCCTCGAG TACTCGCCAA CGCTGACGGG
CCCGCGGTTG CGGCGACCGA AGTTATCGAT CCACGTGCGT ATGGCGTACT CTCGACGGCC
GCTGACGGAT CGCTCACGAA AATCGTCGAG AAGCCTGCTA ACCCGCCGAC GAATCTCGCG
AACGTCGGCT GTTACGCATT TACGCCCGAG GTGTTCGAGT ATATCGACAG GACTCCCGAG
AGCGAACGCG GCGAGTACGA GATCACGACG ACGATCGAAC TGCTGCTCGA CGACGGCCAC
CGGATTGACG TGGCGCCCTA CGTGGGGACG TGGCTCGACG TCGGTCGCCC GTGGGAGTTG
CTAGAAGCCA ACGAACTAGC GCTCACAGAG CTGGGCTCGG ATGAAGCGAT CGCCGGCACC
GTCGAGAAAG GCGTCCACCT CCACGGCTCT GTCGTCGTCG AGGACGGTGC ACTGGTTCGG
TCTGGTGCGT ATATCGAGGG CCCGGTGCTA ATCCGCGAGG GTGCAGAGGT TGGCCCGAAT
GCGTATCTTC GCGGATCGAC GGTGATCGGT CCAGACGCGC ACGTCGGCCA CGGCGTCGAA
GTGAAAAACA GCGTGTTGAT GGCCGACGCG TCAGTGGGCC ACCTCTCGTA CGTTGGCGAC
TCCGTGCTCG GGCGGGGCGT GAACTTCGGC GCGGGGACGA ACGTCGCAAA CCTCCGGCAT
GATGATACAA CCGTCCGCAT GACCGTTAAG GGCGATCGCG TAGATACCGG TCGTCGGAAA
CTCGGTGCGA TCGTTGGCGA CGGCGCAAAA ACCGGGATCA ACACCTCACT AAACGCTGGC
TTCCGGTTGG GGACAGAGGC GACGACCAAG CCGGGCGAAA CGGTGCTTCG CGATCGAATC
TCGGAATAA
 
Protein sequence
MYGVVLAAGR GTRMRPLTDR RPKPLLPVGD RSLLEQVFDT AVDVVDEFVV VTGYRGDAIR 
ESIGESYRDR PVTYVEQEEA KGTAHAIAQA APVVDDDFLV LNGDVVVDAS LPRVLANADG
PAVAATEVID PRAYGVLSTA ADGSLTKIVE KPANPPTNLA NVGCYAFTPE VFEYIDRTPE
SERGEYEITT TIELLLDDGH RIDVAPYVGT WLDVGRPWEL LEANELALTE LGSDEAIAGT
VEKGVHLHGS VVVEDGALVR SGAYIEGPVL IREGAEVGPN AYLRGSTVIG PDAHVGHGVE
VKNSVLMADA SVGHLSYVGD SVLGRGVNFG AGTNVANLRH DDTTVRMTVK GDRVDTGRRK
LGAIVGDGAK TGINTSLNAG FRLGTEATTK PGETVLRDRI SE