Gene Hlac_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2833 
Symbol 
ID7398868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand- 
Start bp95530 
End bp96762 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content57% 
IMG OID643706657 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_002564283 
Protein GI222475762 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCCG ACTCTTCATC CAGTTCTGTC GACGATCCAC TCTTTGAATC CGGGCATCGT 
ATCTTCGCGA ACAAGGACCT CCTGAAAATC GGCCACGTTC CGGAAGCTGA CCGGATCGTC 
GGTCGCGACG AGGAGATCTC GAAGCTCGCG AAACGTCTCA ACGGTGCTGT CCACGGGTAC 
TCCCCGGAGA ACGTGATGAT CTACGGGAAA ACTGGGACCG GTAAATCTCT CGTTTCAAAA 
CACGTCTGCC AGCGAGCTCA AAATGCCGCT CAGGATGGCG TCGAGATTGG AACAGCGTAT 
ATCGACTGTG CTGAAGACAA TACTGAGACT CAGGCGGTCT CCTCACTTGC TGCGAAGCTG 
AACGATGAAT CTACGACTGG AATCTCCGTC CCCCATACCG GCCTCAGTAC GTCGAAATAC 
TACAAACTCC TCTGGAAGAC GCTCGACGCT CAATTCGATT CTGTGATCAT CATCCTCGAC 
GAGATCGATT TGATGAACGA CGACAGCGTG CTGATGAAGC TCTCGCGCGC TGAGGAGGCG 
GGGAAAATCG ACTGTAGCGT CGGTGTCATC GCGATCAGCA ACAAGATCCA GTACGTCGAC 
AACGTGAACG AGCGCGTGAA AAGCAGCTTC CAGCACAAGG AACTGTTCTT CAAGCCATAC 
GACGCTAACC AGCTCCGGGA GATCATGTTC AATCGCGAGG ACGCCTTCCA GGACGGCGTC 
CTTTCCGAGG ACGTGATTCC GCTCTCGGCG GCCTTCGCCG CGCAGGAACA CGGCGATGCT 
CGGAAGGCGA TCGACATTCT TCGCCACGCC GGCGAGGTCG CCTACGAGGC CGGAGCAGAG 
CAAGTGACGG AGGAACACGT CCGCCAGGCA CAGCAGCACG CCGAAAAGGA CCGGTTCAGA 
GAACTCGTGA ATGGCGCACC CACGCAGGCG AAGGCGGCGT TGCTGGCGCT CACAGAACTG 
AGCGTCAACT CCAACGACGC TGCCTTCCTG ACGAGCCGCG TGTACGACCA GTATGAGCGG 
ATCTGCAATC ACCTGGACAT GGACATCCTC TCCGTTCGCC GGTTCCGCGA CATCCTGAAA 
GAGCAAGCCT TCCTCGGGGT TGTCGAAATC GAGAAGATCA ACAAGGGGAG TGCGGGCGGC 
ATCCATCTCC AGAACCGACT CATTGAAGAT CCTCAGGTCG TCCGCGAAAC GATTCTCGAG 
GACAGCCGGA TGCAGGACTG GACTCGCGAG TAG
 
Protein sequence
MTPDSSSSSV DDPLFESGHR IFANKDLLKI GHVPEADRIV GRDEEISKLA KRLNGAVHGY 
SPENVMIYGK TGTGKSLVSK HVCQRAQNAA QDGVEIGTAY IDCAEDNTET QAVSSLAAKL 
NDESTTGISV PHTGLSTSKY YKLLWKTLDA QFDSVIIILD EIDLMNDDSV LMKLSRAEEA 
GKIDCSVGVI AISNKIQYVD NVNERVKSSF QHKELFFKPY DANQLREIMF NREDAFQDGV 
LSEDVIPLSA AFAAQEHGDA RKAIDILRHA GEVAYEAGAE QVTEEHVRQA QQHAEKDRFR 
ELVNGAPTQA KAALLALTEL SVNSNDAAFL TSRVYDQYER ICNHLDMDIL SVRRFRDILK 
EQAFLGVVEI EKINKGSAGG IHLQNRLIED PQVVRETILE DSRMQDWTRE