Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3542 |
Symbol | |
ID | 7384668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3793633 |
End bp | 3795342 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643656859 |
Product | YidC translocase/secretase |
Protein accession | YP_002554965 |
Protein GI | 222112701 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACA TCCGCCGCAC CATCCTGTGG GTGATCTTTG GCTTTTCCAT GGTTCTGCTG TGGGACAAGT GGCAGATCCA CAACGGCAAC AAGGCCACCT TCTTCCCCAC GCCGCCGGCG CAGACGGCCA GCACGCCCGC GGTAGCGGCC TCCGGCGCTG GCGCTGCCGA CGTGCCGGTG GCCGCCGCCA GCGCCACGCC GGGCGCGGCG CCGCAGCCGC CCGCAGGCGC CAGCGTGCCG CCTGCCGCCA TCCCGCGCGA GCGGGTGACC GTGAGCACCG ACGTGCTGCG CCTGAGCTTT GACTCCGAAG GCGGTTCGCT GGTCCACGGA GAGCTGCTGC AATATCCCGA GATGGAGGAC AAGACCAAGC CCTTCCTGCT GCTGGACGAG AGCGCTTCGC GTGTTTATGT CGCGCAGACG GGCCTCATCG GCAACGGTGC CGGCGGCGCC TTCCCCACGC ACAAGACCCC CATGGCGGTC GTGCCCGGTC CGCGCGAACT GCAGGACGGC CAGAACGAGC TGACCGTGCG TTTCGAGTCG GCCGACATGG GCGGCGTGAA GCTGGTCAAG ACCTGGACGC TCAAGCGCGG CGCCTACGAC GTGGCCGTGA AGCATGAGGT GGTCAACACG GGCACGGCCC CGGTATCGCC CCAGCTGTAC CTGCAGTTGG CGCGCGATGG CAACAAGCCG GCGGGCGAGT CGTCGTTCTA CTCCACGTTC ACCGGTCCGG CCGTGTACAC CGAGGCGAAG AAGTACCACA AGGTGGAGTT CAAGGACATC GAGAACGGCA AGGCCGAGAT CGACAAGTCT TCCAGCAACG GCTACGTGGC CATGGTGCAG CACTACTTCG CCACCGCGTG GCTGCTGGGC GACGGCGTGC AGCGCGACAA CTTCGTGCGC AAGGTGGACA CCAACCTGTA CTCGGTGGGC ATGATCACAC CGCTGGGCGA GATCGCCCCC GGCCAGTCGA AGGCCGTGGA CGCGCGCCTG TTCGCCGGCC CGCAGATCGA GACGCTGCTG GAAAAGCTGG CCCCGGGCCT GGAGCTGGTC AAGGACTATG GCTGGCTGAC CATCCTGGCC AAGCCGCTGT ACTGGCTGCT GGACCAGTTG CACAAGGTGC TGGGCAACTG GGGCTGGTCC ATCGTGGCGC TGGTGTTCCT GTTGAAGATC GCGTTCTACT GGCTCAACGC CAAGGCCTAC GCCAGCATGG CCAAGATGAA GGCCATCAAC CCGCGCATCA TGGAAATGCG CGAGCGCCTG AAGGACAAGC CCCAGCAGAT GCAGCAGGAG ATGATGCGCA TCTACCGCGA GGAGAAGGTC AACCCCATGG GCGGCTGCCT GCCCATCATG ATCCAGATCC CGGTGTTCAT CGCGCTGTAC TGGGTGCTGC TGTCCAGCGT GGAGATGCGC AATGCGCCGT GGATCGGCTG GATCAAGGAC CTGTCCTCGC CCGACCCGTT CTTCATCCTG CCGCTCCTGA TGACGCTCTC GTCGCTGCTG CAGACCGCGC TGAACCCCGC GCCGCCGGAC CCGATGCAGG CCAAGATGAT GTGGCTGATG CCGCTGATGT TCAGCGTGAT GTTCTTCTTC TTCCCGGCCG GCCTGGTGCT GTACTGGCTG ACGAACAACA TCCTGTCGAT CGCGCAGCAG TGGATCATCA ACACCCGCAT GGGCGTGCCG CCGCAGTTCA ACCTGCCCAA GTTCCGCTGA
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Protein sequence | MNDIRRTILW VIFGFSMVLL WDKWQIHNGN KATFFPTPPA QTASTPAVAA SGAGAADVPV AAASATPGAA PQPPAGASVP PAAIPRERVT VSTDVLRLSF DSEGGSLVHG ELLQYPEMED KTKPFLLLDE SASRVYVAQT GLIGNGAGGA FPTHKTPMAV VPGPRELQDG QNELTVRFES ADMGGVKLVK TWTLKRGAYD VAVKHEVVNT GTAPVSPQLY LQLARDGNKP AGESSFYSTF TGPAVYTEAK KYHKVEFKDI ENGKAEIDKS SSNGYVAMVQ HYFATAWLLG DGVQRDNFVR KVDTNLYSVG MITPLGEIAP GQSKAVDARL FAGPQIETLL EKLAPGLELV KDYGWLTILA KPLYWLLDQL HKVLGNWGWS IVALVFLLKI AFYWLNAKAY ASMAKMKAIN PRIMEMRERL KDKPQQMQQE MMRIYREEKV NPMGGCLPIM IQIPVFIALY WVLLSSVEMR NAPWIGWIKD LSSPDPFFIL PLLMTLSSLL QTALNPAPPD PMQAKMMWLM PLMFSVMFFF FPAGLVLYWL TNNILSIAQQ WIINTRMGVP PQFNLPKFR
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