Gene Dtpsy_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3542 
Symbol 
ID7384668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3793633 
End bp3795342 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content65% 
IMG OID643656859 
ProductYidC translocase/secretase 
Protein accessionYP_002554965 
Protein GI222112701 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA TCCGCCGCAC CATCCTGTGG GTGATCTTTG GCTTTTCCAT GGTTCTGCTG 
TGGGACAAGT GGCAGATCCA CAACGGCAAC AAGGCCACCT TCTTCCCCAC GCCGCCGGCG
CAGACGGCCA GCACGCCCGC GGTAGCGGCC TCCGGCGCTG GCGCTGCCGA CGTGCCGGTG
GCCGCCGCCA GCGCCACGCC GGGCGCGGCG CCGCAGCCGC CCGCAGGCGC CAGCGTGCCG
CCTGCCGCCA TCCCGCGCGA GCGGGTGACC GTGAGCACCG ACGTGCTGCG CCTGAGCTTT
GACTCCGAAG GCGGTTCGCT GGTCCACGGA GAGCTGCTGC AATATCCCGA GATGGAGGAC
AAGACCAAGC CCTTCCTGCT GCTGGACGAG AGCGCTTCGC GTGTTTATGT CGCGCAGACG
GGCCTCATCG GCAACGGTGC CGGCGGCGCC TTCCCCACGC ACAAGACCCC CATGGCGGTC
GTGCCCGGTC CGCGCGAACT GCAGGACGGC CAGAACGAGC TGACCGTGCG TTTCGAGTCG
GCCGACATGG GCGGCGTGAA GCTGGTCAAG ACCTGGACGC TCAAGCGCGG CGCCTACGAC
GTGGCCGTGA AGCATGAGGT GGTCAACACG GGCACGGCCC CGGTATCGCC CCAGCTGTAC
CTGCAGTTGG CGCGCGATGG CAACAAGCCG GCGGGCGAGT CGTCGTTCTA CTCCACGTTC
ACCGGTCCGG CCGTGTACAC CGAGGCGAAG AAGTACCACA AGGTGGAGTT CAAGGACATC
GAGAACGGCA AGGCCGAGAT CGACAAGTCT TCCAGCAACG GCTACGTGGC CATGGTGCAG
CACTACTTCG CCACCGCGTG GCTGCTGGGC GACGGCGTGC AGCGCGACAA CTTCGTGCGC
AAGGTGGACA CCAACCTGTA CTCGGTGGGC ATGATCACAC CGCTGGGCGA GATCGCCCCC
GGCCAGTCGA AGGCCGTGGA CGCGCGCCTG TTCGCCGGCC CGCAGATCGA GACGCTGCTG
GAAAAGCTGG CCCCGGGCCT GGAGCTGGTC AAGGACTATG GCTGGCTGAC CATCCTGGCC
AAGCCGCTGT ACTGGCTGCT GGACCAGTTG CACAAGGTGC TGGGCAACTG GGGCTGGTCC
ATCGTGGCGC TGGTGTTCCT GTTGAAGATC GCGTTCTACT GGCTCAACGC CAAGGCCTAC
GCCAGCATGG CCAAGATGAA GGCCATCAAC CCGCGCATCA TGGAAATGCG CGAGCGCCTG
AAGGACAAGC CCCAGCAGAT GCAGCAGGAG ATGATGCGCA TCTACCGCGA GGAGAAGGTC
AACCCCATGG GCGGCTGCCT GCCCATCATG ATCCAGATCC CGGTGTTCAT CGCGCTGTAC
TGGGTGCTGC TGTCCAGCGT GGAGATGCGC AATGCGCCGT GGATCGGCTG GATCAAGGAC
CTGTCCTCGC CCGACCCGTT CTTCATCCTG CCGCTCCTGA TGACGCTCTC GTCGCTGCTG
CAGACCGCGC TGAACCCCGC GCCGCCGGAC CCGATGCAGG CCAAGATGAT GTGGCTGATG
CCGCTGATGT TCAGCGTGAT GTTCTTCTTC TTCCCGGCCG GCCTGGTGCT GTACTGGCTG
ACGAACAACA TCCTGTCGAT CGCGCAGCAG TGGATCATCA ACACCCGCAT GGGCGTGCCG
CCGCAGTTCA ACCTGCCCAA GTTCCGCTGA
 
Protein sequence
MNDIRRTILW VIFGFSMVLL WDKWQIHNGN KATFFPTPPA QTASTPAVAA SGAGAADVPV 
AAASATPGAA PQPPAGASVP PAAIPRERVT VSTDVLRLSF DSEGGSLVHG ELLQYPEMED
KTKPFLLLDE SASRVYVAQT GLIGNGAGGA FPTHKTPMAV VPGPRELQDG QNELTVRFES
ADMGGVKLVK TWTLKRGAYD VAVKHEVVNT GTAPVSPQLY LQLARDGNKP AGESSFYSTF
TGPAVYTEAK KYHKVEFKDI ENGKAEIDKS SSNGYVAMVQ HYFATAWLLG DGVQRDNFVR
KVDTNLYSVG MITPLGEIAP GQSKAVDARL FAGPQIETLL EKLAPGLELV KDYGWLTILA
KPLYWLLDQL HKVLGNWGWS IVALVFLLKI AFYWLNAKAY ASMAKMKAIN PRIMEMRERL
KDKPQQMQQE MMRIYREEKV NPMGGCLPIM IQIPVFIALY WVLLSSVEMR NAPWIGWIKD
LSSPDPFFIL PLLMTLSSLL QTALNPAPPD PMQAKMMWLM PLMFSVMFFF FPAGLVLYWL
TNNILSIAQQ WIINTRMGVP PQFNLPKFR