Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3508 |
Symbol | |
ID | 7383421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3757497 |
End bp | 3759500 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643656827 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_002554933 |
Protein GI | 222112669 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGGGA CGAACGTGCT GTTCGGTCAG ATCGCCGTGG TGTTCGGCAT CGTGATCACC GGCGTGTGGG CGGCCACACA ATGGACAGCC GCCGCCCTGG GCTATCAGCT ACGCCTTGGC TCGCCCTGGT TCGACTTCTT CGACACGCCC ATCTATCACC CGTGGCGGCT GTTCGAGTGG TGGTTCTTCT TCGATGCCTA CGCGCCGCGC GTCTTTGACA TCGGTGGTGC CATCGCGGGA GGCAGCGGCC TCGTGGCCGT GCTGGTCGCC ATTGGCATGT CGATCTGGCG CTCGCGGCAA TCGCGCCTGG TCACGACCTA CGGCTCGGCA CGCTGGGCGA ACGCGGATGA CATTCGTAAG GCCGGGCTCA CGCAGCCGAC CGGCGTGTTC CTGGGCCAGC ACGATCGCCA GTACCTGCGG CACGAAGGCC CGGAACACGT TCTGACCTTC GCGCCCACAC GCTCGGGCAA AGGCGTGGGC CTGGTGGTGC CGACACTGTT GAGCTGGCCT GCTTCCGCTG TCATCCACGA CATCAAGGGC GAGAACTGGA GCATCACCGC AGGCTGGCGT TCGCGCTTCT CGCACTGCCT GCTGTTCAAC CCCACCGATG CGAAGTCGGC AGCCTACAAC CCGCTGCTGG AAGTCCGCCG TGGCGCGCAT GAAGTGCGCG ACGTTCAGAA CATCGCGGAC ATCCTGGTCG ATCCCGAAGG CGCGCTGGAG CGACGCAATC ACTGGGAAAA GACTTCGCAC GCGCTGCTGG TCGGCGCAAT CCTGCATGTG CTCTACGCGG GCGAGGACAA GACGCTGCGC GGTGTCGCCA ACTTCCTCAG TGACCCTGCC TGCCCGTTCG AGCTGACCCT GCACCGGATG ATGACCACGC CGCATCTCGG CGATGGCCCG CATCCGGTCG TGGCCTCGGC GGCGCGTGAG GTACTGAACA AATCGGACAA CGAACGCTCC GGCGTGCTGT CCACGGCCAT GTCGTTCTTG GGCCTGTACC GCGACCCCAC GGTGGCCGAA GTCACCTCGC GCTGCGATTG GCGCATCGCT GACCTGATCG CGGCCGAGCA TCCGGTGTCG CTGTACCTGG TGGTGCCGCC TTCGGACATT TCGCGGACGA AGCCGCTGAT TCGCCTGATC CTCAACCAGA TCGGGCGGCG GCTGACGGAA TCGCTTGATG GCTCCGACGG CATCGCGCGC CGCCACAAGC TACTGCTGAT GCTCGACGAG TTCCCGGCCT TGGGGCGCCT GGACTTCTTC GAGACGGCGC TGGCCTTCAT GGCGGGCTAC GGCATCCGCA GCTTCCTCAT CGCGCAGTCG CTCAACCAGA TTGACAAGGC CTACGGCCCG AACCATTCGA TCCTGGACAA CTGCCACGTG CGCGTGACCT TCGCCACCAA TGACGAGCGC ACCGCCAAGC GCATTTCCGA GACGCTGGGC ACCGCGACCG AGCTGCGCGC GCAACGCAAC TACGCGGGCC ACCGACTCGC GCCGTGGCTG GGCCACCTGA TGGTGTCGCG GCAGGAGACG GCCCGGCCGC TCCTGACGCC CGGCGAAGTC ATGCAGCTCC CGCCTGACGA GGCGGTGGTG ATGGTGTCCA GCGTGGCCCC CATCAAGGCC AGGAAGCTGC GCTACTACGC AGACAGCAAT TTCAAACGCC GCGTGTTGCC GCCGCCCGTG CTCACGGCCG GGCGCTATGC CGACGTGCCG CCATCGCGGC CCGACGACTG GAGCGGGCTG GCGATTCCCG CCGTGCCCGC CACACCGGCC ACTGCGTCCA CTGACGGCCT GGGCAGCGCC GACGACGACG GCGGCCCGCG CCGTCAGCCT GAGCTTTCCG AGGCCGTCGC CTACGACCCC GAGCAGACCA CGCCCGCGGC CGACCTCGCG TTGCTCGATG ACGACGACGA CCTGCCGCTC CCCCTTCCTC GCCAGCTTGA TCCGGCCATG CAGCGCACGG CCCGGCTGGC TTCTCTCGAC CCCAACGACG GAATCGAGCT ATGA
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Protein sequence | MQGTNVLFGQ IAVVFGIVIT GVWAATQWTA AALGYQLRLG SPWFDFFDTP IYHPWRLFEW WFFFDAYAPR VFDIGGAIAG GSGLVAVLVA IGMSIWRSRQ SRLVTTYGSA RWANADDIRK AGLTQPTGVF LGQHDRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG ENWSITAGWR SRFSHCLLFN PTDAKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE RRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA CPFELTLHRM MTTPHLGDGP HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIAAEHPVS LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIAR RHKLLLMLDE FPALGRLDFF ETALAFMAGY GIRSFLIAQS LNQIDKAYGP NHSILDNCHV RVTFATNDER TAKRISETLG TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDEAVV MVSSVAPIKA RKLRYYADSN FKRRVLPPPV LTAGRYADVP PSRPDDWSGL AIPAVPATPA TASTDGLGSA DDDGGPRRQP ELSEAVAYDP EQTTPAADLA LLDDDDDLPL PLPRQLDPAM QRTARLASLD PNDGIEL
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