| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3506 |
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| Symbol | |
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| ID | 7382040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3756005 |
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| End bp | 3757039 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643656825 |
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| Product | P-type conjugative transfer ATPase TrbB |
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| Protein accession | YP_002554931 |
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| Protein GI | 222112667 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.19636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG CGCCTTCGTC CTTTGCCACC TCGCTCGACC GCCGCATTCA GATGCTGCGC
ACGGCGATGG GGCCGTTGAT CGCCGCCGCG CTCGAAGACC CGGACGTGGT GGAAGTGATG
CTCAATCCCG ACCGGACGTT ATGGGTGGAT CGCCTGTCCT CGGGCCGCGC GCCGATGGGC
GTGGAGCTGT CCGAAGCAGA CGGCGAGCGA ATCATCCGCC TTGTGGCCGC CCACGTTGGC
GCAGAAGTAC ATCGCGGCCA GCCGTTGCTG TCCGCCGAGT TGCCCGAGAC GGGCGAACGC
TTCGAGGGCA TCTTGCCGCC GGCTGCGCCG GGGCCGGCCT TCGCGCTGCG CAAGCGCGCC
ATCGGCGTGA TTCCGCTGGA GCGGTACGTC ATCGACGGAA TGATGACCAG CGCGCAGGCG
GGCTTTCTCG TTCGCGCTGT GCGCGAGCGC CAGAACGTGC TGATCGCCGG CGCTACCAGC
AGCGGCAAGA CCACGCTCGC CAATGCGCTG CTGGCCGAGA TTGCCGCCAC GGGCGACCGC
GTGCTGGTGC TCGAAGACAC GGTGGAACTG CAATGCGCGG CCCGCGACCA CGTGCCGCTG
CGCACGCGGG CGGGCGTGGT GTCGATGACC GAGCTGGTGC GCTCATCCAT GCGCCTGCGC
CCGGATCGCG TTGTCGTCGG CGAAGTGCGC GGCGCTGAAG CGCTGGATCT CATCAAGGTG
TGGGGCACCG GCCATCCGGG CGGCATCGCC ACGATCCACG CCGGCTCCGC GCTGGGCGCA
CTGCTGCGCC TGGAGCAACT GATTCTCGAA GTGGCGGTGA ACCCGCCCCG TGCGCTGATC
GCGGAAGCGG TCAATGTGGT GATCCACATC GCCGGGCGCG GACGCAAGCG CCGCATCGAG
AGCATCGCCC GCGTCGTCGG CTTCGACGGT GCGGGCTACC GACTGGCGGA TGCGATGGAC
GCGCCGTTTC CCGAGCTGCT GCCGCAGTCC GACCTTTCTT CCTTGTCCCC TGACCACTCT
GGAGAACTGC CATGA
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| Protein sequence | MSAAPSSFAT SLDRRIQMLR TAMGPLIAAA LEDPDVVEVM LNPDRTLWVD RLSSGRAPMG
VELSEADGER IIRLVAAHVG AEVHRGQPLL SAELPETGER FEGILPPAAP GPAFALRKRA
IGVIPLERYV IDGMMTSAQA GFLVRAVRER QNVLIAGATS SGKTTLANAL LAEIAATGDR
VLVLEDTVEL QCAARDHVPL RTRAGVVSMT ELVRSSMRLR PDRVVVGEVR GAEALDLIKV
WGTGHPGGIA TIHAGSALGA LLRLEQLILE VAVNPPRALI AEAVNVVIHI AGRGRKRRIE
SIARVVGFDG AGYRLADAMD APFPELLPQS DLSSLSPDHS GELP
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