Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3412 |
Symbol | |
ID | 7383651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3653402 |
End bp | 3655063 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643656733 |
Product | L-lactate transport |
Protein accession | YP_002554839 |
Protein GI | 222112575 |
COG category | [C] Energy production and conversion |
COG ID | [COG1620] L-lactate permease |
TIGRFAM ID | [TIGR00795] L-lactate transport |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.190436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCTGGC AACAAATCTA CGACCCACTG GGCAATATGG TCATCTCCAC CGCACTGGCC GCGCTGCCGG TGGTGGTCAT GCTCGCGGCC TTGGGCTTTT TCCACATCAA GGCGCATATC GCGGCAGGCA TGGGCCTGAT CACGGCGCTG CTCGTGGCGA TCTTCGTCTA CGGCATGCCG GGCGACATGG CCGGCCGTGC GGCGCTGTTC GGTGGTTTCA CCGGCCTGCT GCCCATCGGC TGGATCGTGC TGAACATCAT CTTCCTGCAC CAGCTCACCG AGCAGAACGG CAGCTTCGCT GTGCTGCAGG ACTCGCTGTC GGGCATCACC GAGGACCGGC GCATCCAGCT GCTGCTGATC GCCTTTTGCT TCGGCGCGTT CTTTGAAGGC GCGGCCGGCT TCGGCACCCC CGTGGCGGTG ACGGCGGCCA TCCTGATCGG CCTGGGCTTC TCGCCGCTGG CGGCCTCGGG CCTGTCGCTG ATCGCCAATA CGGCGCCGGT GGCCTTTGGC GCCCTGGGCA CGCCGGTGAT CACGCTGGCC AAGGTGCACG GCTACGACCT GATGGAGGTG ACGGCCATGA TCGGCCGCCA GCTGCCCTTC TTCTCGCTGC TGGTGCCGTT TTGGCTGATC TGGGCCTTCG CCGGCCGCAA GGGCATGATG GAAATCTGGC CGGCCATCCT GGTGACGGGC GTGTCCTTCG CCATTCCTCA GTTCCTGGTG TCCAACTTCA TCGGGCCCGA ACTGGTGGAC ATCATCGCCG CCATCGTCTC CATGGTCTGC CTGGTGGCCT TCCTGCGCGT GTGGAAGCCC AAGACGGTGT GGACGTCGCC CTCGCTGCGC GGGCATGACC CCAGCGCCGC AGAGGCCAAG CCGCCGCAGC CGGTCAAGCG CCACAGCACC CAGGCGTTGG TGGCCGCCTG GACCCCCTGG GTCATCCTGT CGGTGTTCGT GTTCATCTGG GGCCTGCCCT CGGTCAAGGC CTGGCTCAAT GGCATCTTCG CGCCGGCCTT CCCCATGGCC GGGCTGCACA ACCTGATCGA GAAGGTGCCG CCCGTGGTGC CCGCGCCGCA CAAGGAGGCC GCCGTCTACA CGCTGAACCT GCTGTCGGCC ACCGGCACGG GCATCCTGCT GTCGGCCGTG GTGAGCGCGC TGGTCATGAA GTACAACCCG GTGGCCATCG TCACCACGTT CTTCCGCACC TTCTGGCTGG TGCGCTACTC GCTGCTCACC ATCGTGCTGA TGCTGGCGCT GGGTACGCTC ACGCGCTATT CGGGCACCGA CACCACGCTG GGCCTGGCTT TTGCCAATAC CGGCGTGCTG TACCCGTTCT TTGGCACGCT CATGGGCTGG ATCGGCGTGG CGCTCACGGG ATCGGACACG GCCTCCAACG TGCTCTTCGG TGGCATGCAG AAGGTGGCAG CCGAGCAATT GGGCCTGTCG GCCAACCTGA TGGGCGCAGC CAACAGCTCG GGCGGCGTGA TGGGCAAGAT GATCGACGCG CAGTCCATCG TCGTGGCCTC CACCGCCACC CGCTGGTTCG ACCACGAGGG CGACATCCTG CGCTACGTGT TCTTCCACTC CATCGCGCTG GCCTGCCTGG TGGGCCTGTA CGTGACGATG CAGGCCTATG TCTGGCCGTT CTCCCTCATG GTGGTGCACT GA
|
Protein sequence | MVWQQIYDPL GNMVISTALA ALPVVVMLAA LGFFHIKAHI AAGMGLITAL LVAIFVYGMP GDMAGRAALF GGFTGLLPIG WIVLNIIFLH QLTEQNGSFA VLQDSLSGIT EDRRIQLLLI AFCFGAFFEG AAGFGTPVAV TAAILIGLGF SPLAASGLSL IANTAPVAFG ALGTPVITLA KVHGYDLMEV TAMIGRQLPF FSLLVPFWLI WAFAGRKGMM EIWPAILVTG VSFAIPQFLV SNFIGPELVD IIAAIVSMVC LVAFLRVWKP KTVWTSPSLR GHDPSAAEAK PPQPVKRHST QALVAAWTPW VILSVFVFIW GLPSVKAWLN GIFAPAFPMA GLHNLIEKVP PVVPAPHKEA AVYTLNLLSA TGTGILLSAV VSALVMKYNP VAIVTTFFRT FWLVRYSLLT IVLMLALGTL TRYSGTDTTL GLAFANTGVL YPFFGTLMGW IGVALTGSDT ASNVLFGGMQ KVAAEQLGLS ANLMGAANSS GGVMGKMIDA QSIVVASTAT RWFDHEGDIL RYVFFHSIAL ACLVGLYVTM QAYVWPFSLM VVH
|
| |