Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3403 |
Symbol | pyrF |
ID | 7383642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3640122 |
End bp | 3640988 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643656724 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_002554830 |
Protein GI | 222112566 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.57419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCACG GCAGCGGCAC GGTGTTGCCT AAAATCACGG ACATGACTTT TCTTGACATG CTGCGCGACG CCACCACGCG CAACGACTCC CTGCTGTGCG TGGGCCTGGA CCCCGAACCC ACGCGCTTTC CCGAGTCCGT GCGTGGCGAG GCGCACAAGA TCTACGACTT CTGCGCCGCC ATCGTGGACG CCACGGCCGA CCTGGTGTGC GCCTTCAAGC CGCAGATCGC CTACTTCGCC GCGCACCGTG CCGAGGACCA GCTGGAGCGC CTGATGCAGC ACATGCGCTG CAACGCCCCG CATGTGCCCG TGATCCTGGA CGCCAAGCGC GGCGACATCG GCTCCACCGC CGAGCAGTAC GCCAAAGAGG CCTTCGAGCG TTATGGCGCC GACGCCGTGA CGCTCTCGCC CTTCATGGGC TTTGACTCCA TCGAGCCCTA TCTGGCCTAC CACGGCAAGG GGGCTTTCCT GCTGTGCCGC ACCTCCAACC CCGGTGGCGA TGACCTGCAG GCCCAGCGCC TGGCCAGCGT CGAAGGTCAG CCGCTGCTGT ACGAACACGT GGCCCGCCAG GCGCAGGGCC CCTGGAACAA GAACGGCCAG CTCGGCCTGG TGGTGGGCGC CACGTACCCG CAAGAAATTG AGCGCGTGCG CGCGCTCGCA CCCACGCTGC CGCTGTTGAT CCCCGGCGTA GGCGCGCAGG GCGGCGACGC AGCCGCCACC GTGCGCGCCG GGCTGCGCGC CGACGGGCCA ATCATCGTGA ACTCTTCGCG CGCCGTGCTC TATGCCTCGG GCGGTGCGGA CTTTGCCGCG GCCGCACGCA ACGCAGCCCA GGCCACGCGC GCCGCGCTCA ACGCCGCGCG CGCCTAG
|
Protein sequence | MAHGSGTVLP KITDMTFLDM LRDATTRNDS LLCVGLDPEP TRFPESVRGE AHKIYDFCAA IVDATADLVC AFKPQIAYFA AHRAEDQLER LMQHMRCNAP HVPVILDAKR GDIGSTAEQY AKEAFERYGA DAVTLSPFMG FDSIEPYLAY HGKGAFLLCR TSNPGGDDLQ AQRLASVEGQ PLLYEHVARQ AQGPWNKNGQ LGLVVGATYP QEIERVRALA PTLPLLIPGV GAQGGDAAAT VRAGLRADGP IIVNSSRAVL YASGGADFAA AARNAAQATR AALNAARA
|
| |