Gene Dtpsy_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3403 
SymbolpyrF 
ID7383642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3640122 
End bp3640988 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID643656724 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_002554830 
Protein GI222112566 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.57419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACG GCAGCGGCAC GGTGTTGCCT AAAATCACGG ACATGACTTT TCTTGACATG 
CTGCGCGACG CCACCACGCG CAACGACTCC CTGCTGTGCG TGGGCCTGGA CCCCGAACCC
ACGCGCTTTC CCGAGTCCGT GCGTGGCGAG GCGCACAAGA TCTACGACTT CTGCGCCGCC
ATCGTGGACG CCACGGCCGA CCTGGTGTGC GCCTTCAAGC CGCAGATCGC CTACTTCGCC
GCGCACCGTG CCGAGGACCA GCTGGAGCGC CTGATGCAGC ACATGCGCTG CAACGCCCCG
CATGTGCCCG TGATCCTGGA CGCCAAGCGC GGCGACATCG GCTCCACCGC CGAGCAGTAC
GCCAAAGAGG CCTTCGAGCG TTATGGCGCC GACGCCGTGA CGCTCTCGCC CTTCATGGGC
TTTGACTCCA TCGAGCCCTA TCTGGCCTAC CACGGCAAGG GGGCTTTCCT GCTGTGCCGC
ACCTCCAACC CCGGTGGCGA TGACCTGCAG GCCCAGCGCC TGGCCAGCGT CGAAGGTCAG
CCGCTGCTGT ACGAACACGT GGCCCGCCAG GCGCAGGGCC CCTGGAACAA GAACGGCCAG
CTCGGCCTGG TGGTGGGCGC CACGTACCCG CAAGAAATTG AGCGCGTGCG CGCGCTCGCA
CCCACGCTGC CGCTGTTGAT CCCCGGCGTA GGCGCGCAGG GCGGCGACGC AGCCGCCACC
GTGCGCGCCG GGCTGCGCGC CGACGGGCCA ATCATCGTGA ACTCTTCGCG CGCCGTGCTC
TATGCCTCGG GCGGTGCGGA CTTTGCCGCG GCCGCACGCA ACGCAGCCCA GGCCACGCGC
GCCGCGCTCA ACGCCGCGCG CGCCTAG
 
Protein sequence
MAHGSGTVLP KITDMTFLDM LRDATTRNDS LLCVGLDPEP TRFPESVRGE AHKIYDFCAA 
IVDATADLVC AFKPQIAYFA AHRAEDQLER LMQHMRCNAP HVPVILDAKR GDIGSTAEQY
AKEAFERYGA DAVTLSPFMG FDSIEPYLAY HGKGAFLLCR TSNPGGDDLQ AQRLASVEGQ
PLLYEHVARQ AQGPWNKNGQ LGLVVGATYP QEIERVRALA PTLPLLIPGV GAQGGDAAAT
VRAGLRADGP IIVNSSRAVL YASGGADFAA AARNAAQATR AALNAARA