| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3395 |
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| Symbol | |
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| ID | 7383634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3633237 |
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| End bp | 3634496 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643656716 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002554822 |
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| Protein GI | 222112558 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCTC AGGCCCGTAT GCGCGTGACC GCGCTCGGAG CACTGGCTTT GTTGGCGGGT
GCCGCCATGG CACCGGCGGC ACAGGCCCAG AATTACCCGA TTACCTCCGA GCAGCGCGCC
ACCGCGCAGC AGGTGGCTTC ACGCGGCGTT CCCCTTTCCG AATTGGCCGC CAATGCGCCC
GATACCTACG TGGTGAAACG CGGAGACACG CTGTGGGGTA TTTCCGGCAT GTATTTGAAG
CGCCCCTGGC GCTGGCCGGA ACTGTGGGGC ATGAATCTGC AGTCCATTCC CAACCCGCAC
CTGATTTTCC CGGGTCAGAC GCTGTACCTG GAAAAGGTGG ACGGCTATGC CCGCCTGAGC
ACCAGCCGCA AAGGCGCGCC CGAGACCGTG CGCGTGTCGC CGCGCACGCG CTATGACAGC
CTGGCCGGCA CGGCGCTGCC CACGCTCAAG CCGCACCTGA TCGAACCCTT CCTCGTCGAG
CCTCTGGTGG TGGACGAGCT CACGCTGCAG CAGGCTCCGC GCATCGTGGC CACGCGCGAC
GAACGCATGA TCATGGCCAA CGGCGACCGC GCCTACGTGC GCGGCCCTGA AGGCAGTCCC
CTCGTGATGG CGCCTGGCGT GCCGCGCCAG TACCGCGTGT TCCGCAACGC CATTCCACTG
AAGGATCCGC ACACTGGTGA GGTGCTGGGC TACGAAGCGC AGTATGTCGG CCGCGCCGAA
CTGGTGCGCA GTGAAACTAC CACTCCCGTG CCCCAGCGCG ATGTAGCGCG GGGCAAGAGT
TCCAGCGAGG GCCGGGGGGA AGTGCTGGAG GGGCAAGCCG ACGGCACAGC GGTGGACATC
GTTCCCGCCA CGGTGGACCT GAGGGGCGCG AAGGAAGAGA TCCGCGCCGG CGACCGCCTG
CTGCCCGCAC CACAGCGCAG CTTCAACAGC TACACCCCGC GGGCACCGCT GGGCCCCGTG
GATGCCAGCG TGGTATCGAT CTACGGCAGC GCGGCCGTGG CCTATGCCGG CCAGAACCAA
GTGATCACCA TCAACCGCGG TACGCGCGAC GGCATGGAAG CCGGCCACGT GCTGCAGCTG
CTCACGCAGG GCGAGCGCTT CAAGGACAAG ACCGACGAGC AGCGCGCCAT GGTGCGCCTG
CCCAGCGAGA GCAATGGCGT GGCGATGGTG TTCCTCACGT TCGACCGCGT GTCCTACGCC
CTGATCCTGC AGTCGCAGCA GGCGGTGCGT GTGGGCGACC GTCTGGTCAA CCCCGAGTAA
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| Protein sequence | MAAQARMRVT ALGALALLAG AAMAPAAQAQ NYPITSEQRA TAQQVASRGV PLSELAANAP
DTYVVKRGDT LWGISGMYLK RPWRWPELWG MNLQSIPNPH LIFPGQTLYL EKVDGYARLS
TSRKGAPETV RVSPRTRYDS LAGTALPTLK PHLIEPFLVE PLVVDELTLQ QAPRIVATRD
ERMIMANGDR AYVRGPEGSP LVMAPGVPRQ YRVFRNAIPL KDPHTGEVLG YEAQYVGRAE
LVRSETTTPV PQRDVARGKS SSEGRGEVLE GQADGTAVDI VPATVDLRGA KEEIRAGDRL
LPAPQRSFNS YTPRAPLGPV DASVVSIYGS AAVAYAGQNQ VITINRGTRD GMEAGHVLQL
LTQGERFKDK TDEQRAMVRL PSESNGVAMV FLTFDRVSYA LILQSQQAVR VGDRLVNPE
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