Gene Dtpsy_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3370 
Symbol 
ID7383609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand+ 
Start bp3607990 
End bp3608676 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID643656691 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002554797 
Protein GI222112533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0063882 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCGC TCAAACTGTT TTCCGAACAG GGCTACGCCA AGACCTCGAT CCGCGCGATC 
GCCGCCGAGG CCCAGGTCAA CGTGGCCTCG GTGAGCTACT ACTTCGGCGA CAAGGCCGCG 
CTGTACGCGG CGCTGTTTTC CGCGCCCTTC GGCTCGCTGC AATCGCTGGT GCCCGACTTC 
ATGCGCCCCG GCCTGTCCCT GCGCGCCGCG CTGCACTGCT TCTACCAGGG CGCGCTGGGG 
CCGCTGCACG ACGGCGAGAT GGCACGCCAG GTGGTGCGGC TGCACATCCG TGAAATGCTG 
GAGCCCACGG CGCAGTGGCA GATCGAGCTG GAAAAAGACG TGCGCGCACC CAACGAGGCC 
ATGGCCGCGC TGCTGTGCCG GCACCTGGGG CTGCCGCAGG CCGACGACGA CCTGCACCGC 
CTCACGCTCA CCGTCACCGG ACTGGCCTTT CAGCTGTGGA GCCACCAGGA AGTGGTGTGC 
GCCATGCAGC CACAGCTGCT CGCATCCCCG GCGGCCGTGG ACCAGTGGGC GGAACGCCTG 
GCCGACTACG CCATGGCCAT GGTGGCCACC GAGCGGCGCC GGCGTACGCG CGCTCAGCCT 
GTCCGCCCTT CTACTCCAGC CTCGCCCTCC CCTTCGACCT CTTCCACCCC CCGCCGGCGC 
ACCGCCCGCA GGTCTACCGC ACCATGA
 
Protein sequence
MAALKLFSEQ GYAKTSIRAI AAEAQVNVAS VSYYFGDKAA LYAALFSAPF GSLQSLVPDF 
MRPGLSLRAA LHCFYQGALG PLHDGEMARQ VVRLHIREML EPTAQWQIEL EKDVRAPNEA 
MAALLCRHLG LPQADDDLHR LTLTVTGLAF QLWSHQEVVC AMQPQLLASP AAVDQWAERL 
ADYAMAMVAT ERRRRTRAQP VRPSTPASPS PSTSSTPRRR TARRSTAP