| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3339 |
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| Symbol | |
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| ID | 7385238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3562933 |
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| End bp | 3565878 |
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| Gene Length | 2946 bp |
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| Protein Length | 981 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643656661 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_002554767 |
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| Protein GI | 222112503 |
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| COG category | [B] Chromatin structure and dynamics
[L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAA CACTGGTAAT TGCAGAAAAG CCCTCGGTGG CGCAGGACAT CGTGCGCGCC
CTCACGCCGG TTGCCGGCAA GTTCGAGAAG CACGAGGACC ATTTCGAGAA TGAGCGCTAC
GTGGTCACCA GCGCCGTGGG CCACCTGGTG GAGATCCAGG CGCCCGAGGA ATTCGACGTC
AAGCGCGGCA AGTGGAGCTT TGCCCACCTG CCGGTGATCC CGCCGTATTT CGACCTGAAG
CCCGTGGACA AGACCAAGAG CCGCCTGAAC GCGGTGGTCA AGCAGGCCAA GCGCAAGGAC
GTGACCGAAC TGGTCAACGC CTGTGACGCG GGCCGCGAGG GGGAGTTGAT CTTCCGCCTG
ATCGAGCAGT ACGCCGGCGG CGCCAAGGGG ACGTTGGCCA AACCCGTCCG TCGCCTGTGG
CTGCAGAGCA TGACGCCCCA GGCCATCCGC GACGGCTTCG AGAACCTGCG CAGCGACCAG
CAGATGCAGG GCCTGGCCAG CGCCGCGCGC AGCCGCTCCG AGGCCGACTG GCTGGTGGGC
ATCAACGGCA CGCGCGCCAT GACGGCCTTC AACTCGCGCG ACGGTGGGTT CTTTTTGACC
ACCGTGGGCC GCGTGCAGAC GCCCACGCTG TCGCTGGTGG TGGAGCGCGA GGAAAAAATC
CGCAAGTTCG TCAGCCGCGA CTACTGGGAA ATCCACGCGG GCTTTCATGC CGAAGCCGGC
GAATACCTGG GCAAGTGGTT CGACCCCAAG TGGAAGAAGA GCGACGACCC CGAGGCCCGC
GCCGACCGCG TCTGGTCGCA CCACCAGGCC AAGGACATCG CCGACGCCGT GCGCGGCAAG
GCCGCCACCG TCACCGAGGA AAGCAAGCCC ACCACCCAGG CATCGCCGCT GCTGTTCGAC
CTGACCAGCC TGCAGCGTGA GGCCAATGGC AAGTTCGGCT TCTCCGCCAA GACCACGCTG
GCCCTGGCGC AAAGCCTGTA CGAACGCCAC AAGGCGCTGA CCTACCCGCG TACCGACTCG
CGCGCGCTGC CCGAGGACTA CCTGCCCGTG GCCAGGCAGA CCTTCGGCAT GCTGGCCGGC
AGCGGCATGC GCCACCTGGC GCCGTTCGCG CAGCAGGCGC TGGACGACGG CTACGTGCGC
CCGTCCAAGC GTATCTTCGA CAACAGCAAG GTGAGCGACC ACTTTGCCAT CATCCCCACC
ACGCAGGCCC CCAGCGGCCT GTCCGAGGCC GAGCAAAAGC TCTACGACCT GGTGGTGCGC
CGCTTCATGG CGGTGTTCTT CCCCAGTGCC GAATACCAGG TCACCACGCG CATCAGCCAG
GTGGTGGGCC ACTCGTTCAA GACCGAGGGC AAGGTGCTGA TCAAGCCCGG CTGGCTGGCC
ATCTACGGCA AGGAAGCCGC CAACGAGGTC GAAGACGGCA AGGCCGGCGA CAAGGGCCAG
CCGCTGGTGC CCGTCAAGCC CGGCGAGATG ACCCACACCG AGTTCGCCGA GGCCAAGGGC
CTGAAGACCA AGCCGCCCGC GCGCTACTCC GAAGCCACGC TGCTGGGCGC CATGGAAAGC
GCCGGCAAGC AGATCGACGA CGACGAGCTG CGCGAAGCCA TGCAGGAGAA AGGCCTGGGC
ACGCCGGCCA CGCGCGCGGC CATCATCGAA GGCCTGCTGA CCGAAAAATA CATGCTGCGC
GAAGGCCGCG AGCTGATCCC CACGGCCAAG GCCTTCCAGC TCATGACGCT GCTGCGCGGC
CTGGATGTGC AGGAGCTGTG CCGCGCCGAC CTGACGGGCG AGTGGGAATT CAAGCTCGCG
CAAATGGAAA AGGGCCAGCT GAGCCGCGAA GCCTTCATGC AGCAGATCCA GGCCATGACC
GAGAAGCTGG TCAAGAAGGC CAAGGAATAC GACCGCGACA CCATTCCCGG CGACTACGCC
ACCCTGTCCA CGCCGTGCCC CAACTGCGGC GGCGTGGTGA AGGAGAACTA CCGCCGCTAC
GCCTGCACGG GCGCGAACGG CGCGGGCGAG GGCTGCGGCT TCTCGTTCAC CAAGTCGCCC
GCGGGCCGCA CGTTTGAAAC CGCCGAGGCC GAGCAGCTAT TGCGCGACCG CCGCATCGGC
CCGCTGGAGG GCTTCCGCTC CAAGGCCGGC TGGCCCTTCG TGGCAGAGGT CACCATCGCC
CGCGACGAAG AGGCGGGCAA CTACAAACTC GAATTCGACT TTGGCGACGA CAAGAACGCC
GAGGAGTCGG GCGAGATCGT GGACTTTGCC GGCCAGGAAA GCTTAGGTGC CTGCCCCAGC
TGCGGCGCCC CCGTGTATGA ACACGGCAGC AACTACGTGT GCAGCAAATC CGTGCCCACC
GCCCAGCAGC CCACGCCGTC GTGCACCTTC AAGAGCGGCA AGGTCATCCT GCAGCAGCCC
GTGGAGCGCG CGCAGATGCA AAAGCTGCTG GCCACCGGCA AGACCGACCT GCTGGACAAG
TTCGTCAGCA TGCGCACGCG CCGCGCGTTC AAGGCCTTCC TGGCCTGGGA CAAGGAGGCG
GGCAAGGTCA ACTTCGAGTT CGAGCAGCGC GAATCCAAAT ACCCGCCGCG CAAGACGGCT
GCTGCAAAAA CAGGAGCTGC CAGCGCACGT GGGACGGGCG CTGGAGCCGT AAAAGCCTCT
AAACCCGCCA CCAAGGCCGC CGCCAAGAAG GCCGCCGCCA AAACCACGGC CGCCAAGACC
CCGCGCAAGG CCAGCACCGC CGCCGGCAAG GCGCCCAGCG CCCAACTGGC CGCCGTGATT
GGCACTGAGC CCGTGGCGCG CCCCGAGGCC GTCAAGAAGA TGTGGGACTA CATCAAGGCC
CACAACCTGC AGGACCCGCA GGACAAGCGC ACCATCGTCG CCGACGACAA GCTGCGCGCC
GTCTTCGGCA AGGACCGCAT CGGCATGTTC GAGCTGGCCG GCATCCTGGG CCAGCACCTG
GCCTGA
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| Protein sequence | MTKTLVIAEK PSVAQDIVRA LTPVAGKFEK HEDHFENERY VVTSAVGHLV EIQAPEEFDV
KRGKWSFAHL PVIPPYFDLK PVDKTKSRLN AVVKQAKRKD VTELVNACDA GREGELIFRL
IEQYAGGAKG TLAKPVRRLW LQSMTPQAIR DGFENLRSDQ QMQGLASAAR SRSEADWLVG
INGTRAMTAF NSRDGGFFLT TVGRVQTPTL SLVVEREEKI RKFVSRDYWE IHAGFHAEAG
EYLGKWFDPK WKKSDDPEAR ADRVWSHHQA KDIADAVRGK AATVTEESKP TTQASPLLFD
LTSLQREANG KFGFSAKTTL ALAQSLYERH KALTYPRTDS RALPEDYLPV ARQTFGMLAG
SGMRHLAPFA QQALDDGYVR PSKRIFDNSK VSDHFAIIPT TQAPSGLSEA EQKLYDLVVR
RFMAVFFPSA EYQVTTRISQ VVGHSFKTEG KVLIKPGWLA IYGKEAANEV EDGKAGDKGQ
PLVPVKPGEM THTEFAEAKG LKTKPPARYS EATLLGAMES AGKQIDDDEL REAMQEKGLG
TPATRAAIIE GLLTEKYMLR EGRELIPTAK AFQLMTLLRG LDVQELCRAD LTGEWEFKLA
QMEKGQLSRE AFMQQIQAMT EKLVKKAKEY DRDTIPGDYA TLSTPCPNCG GVVKENYRRY
ACTGANGAGE GCGFSFTKSP AGRTFETAEA EQLLRDRRIG PLEGFRSKAG WPFVAEVTIA
RDEEAGNYKL EFDFGDDKNA EESGEIVDFA GQESLGACPS CGAPVYEHGS NYVCSKSVPT
AQQPTPSCTF KSGKVILQQP VERAQMQKLL ATGKTDLLDK FVSMRTRRAF KAFLAWDKEA
GKVNFEFEQR ESKYPPRKTA AAKTGAASAR GTGAGAVKAS KPATKAAAKK AAAKTTAAKT
PRKASTAAGK APSAQLAAVI GTEPVARPEA VKKMWDYIKA HNLQDPQDKR TIVADDKLRA
VFGKDRIGMF ELAGILGQHL A
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