| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3289 |
|---|
| Symbol | |
|---|
| ID | 7385188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3516225 |
|---|
| End bp | 3516935 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643656612 |
|---|
| Product | peptidase M22 glycoprotease |
|---|
| Protein accession | YP_002554718 |
|---|
| Protein GI | 222112454 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC TTGCCTTCGA CACCAGTACC GACGCGCTGT CCATCGCCGT ACAACACGGC
GCGCGCGTGT GGCAGCACAG CGGCGCCGGC GGCGCCCAGG CCTCGGCCAC GCTGATCCCG
GCCATCCGCG ACCTGCTCGC GCAGGCCGGA CTGTCGTTCG ACCAGCTGGA CGCCGTGGTG
TTCGGGCGCG GCCCGGGCTC GTTCACGGGG CTGCGCACCG CGTGCGCGGT GGCCCAGGGC
CTGGCCTTTG GCGCGCGCGG GGGGCAGGGC GTGCCCGTGC TGCCGGTGGA CACGCTGCTC
GCCGTGGCCG AAGAGGCCCG CGCGCAGCAC GGCTGCACGC GGGTGGTGGC GACGCTGGAC
GCCCGCATGA ACGAGGTCTA CGCGGCACCC TTTGAATGGC AGGCCGACGG CCGCTGGCAG
GTGCCGCAGG ACTTCCAGCT GCTGGCGCCC GAGGCCCTGG CCGTGGCGGA TGGCTGGACG
GTCGCCGGCA ATGCCCGCGC CGCCTACGGC GAGCGCCTCG CGCCGCAGGC CCCGCACATG
CACGCCCTGC CTACGGCGGC GGCCCTGCTC CGGCTGGCAC CGGCGCTGCT GGCGGCGGGC
GCGGGCGTGG CGGCCGACGC AGCGCTGCCG CGCTACATCC GCGATAAAGT GGCGCAAACC
ACCGCCGAGC GAGAAGCCGC CCGCCAAGCC GCGCCGGCCC CCCAGACATG A
|
|---|
| Protein sequence | MNLLAFDTST DALSIAVQHG ARVWQHSGAG GAQASATLIP AIRDLLAQAG LSFDQLDAVV
FGRGPGSFTG LRTACAVAQG LAFGARGGQG VPVLPVDTLL AVAEEARAQH GCTRVVATLD
ARMNEVYAAP FEWQADGRWQ VPQDFQLLAP EALAVADGWT VAGNARAAYG ERLAPQAPHM
HALPTAAALL RLAPALLAAG AGVAADAALP RYIRDKVAQT TAEREAARQA APAPQT
|
|---|
| |